feat(scripts): add person enrichment and slot mapping utilities
Person Enrichment Scripts: - enrich_person_comprehensive.py: Full-featured web search enrichment via Linkup with Rule 6/21/26/34/35 compliance (dual timestamps, no fabrication) - enrich_ppids_linkup.py: Batch PPID enrichment pipeline - extract_persons_with_provenance.py: Extract person data from LinkedIn HTML with XPath provenance tracking LinkML Slot Management: - update_slot_mappings.py: Update slots for RiC-O naming (Rule 39) and semantic URI requirements (Rule 38) - update_class_slot_references.py: Update class files referencing renamed slots - validate_slot_mappings.py: Validate slot definitions against ontology rules All scripts follow established project conventions for provenance and ontology alignment.
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scripts/enrich_person_comprehensive.py
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scripts/enrich_person_comprehensive.py
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#!/usr/bin/env python3
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"""
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Comprehensive Person Profile Enrichment via Linkup Web Search
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This script enriches person profiles with ALL discoverable data from web sources,
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with FULL PROVENANCE for every claim. No data is stored without a verifiable source.
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Rule Compliance:
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- Rule 6: WebObservation Claims MUST Have XPath Provenance (adapted for web search)
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- Rule 21: Data Fabrication is Strictly Prohibited
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- Rule 26: Person Data Provenance - Web Claims for Staff Information
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- Rule 34: Linkup is the Preferred Web Scraper
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- Rule 35: Provenance Statements MUST Have Dual Timestamps
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Data Extracted (when available):
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- Birth date/year
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- Birth location
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- Education history
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- Career milestones
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- Publications
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- Awards/honors
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- Professional affiliations
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- Death date (if applicable)
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Usage:
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python scripts/enrich_person_comprehensive.py --limit N [--dry-run]
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"""
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import json
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import os
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import re
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import time
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import argparse
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from datetime import datetime, timezone
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from pathlib import Path
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from typing import Optional, Dict, Any, List
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import httpx
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# Constants
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LINKUP_API_URL = "https://api.linkup.so/v1/search"
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SCRIPT_VERSION = "1.0.0"
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def get_linkup_api_key() -> str:
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"""Get Linkup API key from environment."""
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env_path = Path(__file__).parent.parent / ".env"
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if env_path.exists():
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with open(env_path) as f:
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for line in f:
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if line.startswith("LINKUP_API_KEY="):
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return line.strip().split("=", 1)[1].strip('"\'')
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key = os.environ.get("LINKUP_API_KEY", "")
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if not key:
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raise ValueError("LINKUP_API_KEY not found")
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return key
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def search_linkup(query: str, api_key: str, depth: str = "standard") -> Dict[str, Any]:
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"""Execute Linkup search query."""
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headers = {
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"Authorization": f"Bearer {api_key}",
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"Content-Type": "application/json"
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}
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payload = {"q": query, "depth": depth, "outputType": "sourcedAnswer"}
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try:
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with httpx.Client(timeout=45.0) as client:
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response = client.post(LINKUP_API_URL, headers=headers, json=payload)
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response.raise_for_status()
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return response.json()
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except Exception as e:
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return {"error": str(e)}
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def create_web_claim(
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claim_type: str,
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claim_value: Any,
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source_url: str,
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source_title: str,
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source_snippet: str,
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search_query: str
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) -> Dict[str, Any]:
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"""
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Create a web claim with full provenance per Rules 6, 26, 35.
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CRITICAL: Every claim MUST have verifiable source information.
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NO confidence scores - provenance is the only measure of quality.
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"""
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timestamp = datetime.now(timezone.utc).isoformat()
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return {
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"claim_type": claim_type,
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"claim_value": claim_value,
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"provenance": {
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"statement_created_at": timestamp,
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"source_archived_at": timestamp, # Web search result is ephemeral
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"retrieval_agent": f"enrich_person_comprehensive.py v{SCRIPT_VERSION}",
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"retrieval_method": "linkup_web_search",
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"search_query": search_query,
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"source_url": source_url,
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"source_title": source_title,
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"source_snippet": source_snippet,
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"extraction_method": "regex_pattern_matching",
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"verified": False, # Requires human verification
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"verification_status": "machine_extracted"
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}
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}
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def extract_birth_year(text: str) -> Optional[Dict[str, Any]]:
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"""Extract birth year with context snippet."""
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if not text:
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return None
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# Patterns ordered by specificity - most reliable first
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# NOTE: The lifespan pattern uses a raw year check to avoid false positives
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# from position tenure dates like "(2001–2014)"
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patterns = [
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# "born on 7 September 1968" or "born 7 September 1968" (day before month)
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(r'born\s+(?:on\s+)?(\d{1,2}\s+\w+\s+)?(\d{4})', None, "full_date"),
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# "born on September 28, 1954" (US format: month before day)
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(r'born\s+(?:on\s+)?(\w+\s+\d{1,2},?\s+)(\d{4})', None, "us_date"),
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# "was born in 1968" or "born in 1968"
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(r'(?:was\s+)?born\s+in\s+(\d{4})', None, "born_in_year"),
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# "geboren in 1968" (Dutch)
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(r'geboren\s+(?:in\s+)?(\d{4})', None, "dutch"),
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# "(born 1968)"
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(r'\(born\s+(\d{4})\)', None, "parenthetical"),
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# "(1960)" alone - only years before 1990 to avoid tenure dates
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(r'\((\d{4})\)', None, "year_only_paren"),
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]
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for pattern, _, pattern_type in patterns:
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match = re.search(pattern, text, re.IGNORECASE)
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if match and match.lastindex is not None:
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# Get the year (last group is always the year)
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year = int(match.group(match.lastindex))
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# Validate year range
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if not (1900 <= year <= 2010):
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continue
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# For "year_only_paren" pattern, only accept years before 1990
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# to avoid false positives from tenure dates like "(2001–2014)"
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if pattern_type == "year_only_paren" and year >= 1990:
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continue
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start = max(0, match.start() - 40)
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end = min(len(text), match.end() + 40)
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return {
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"year": year,
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"snippet": text[start:end].strip(),
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"pattern_type": pattern_type
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}
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return None
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def extract_birth_location(text: str) -> Optional[Dict[str, Any]]:
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"""Extract birth location."""
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patterns = [
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(r'born\s+in\s+([A-Z][a-zA-Z\s]+(?:,\s*[A-Z][a-zA-Z\s]+)?)', 0.90),
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(r'geboren\s+(?:te|in)\s+([A-Z][a-zA-Z\s]+)', 0.90),
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(r'native\s+of\s+([A-Z][a-zA-Z\s]+)', 0.85),
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]
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for pattern, _ in patterns:
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match = re.search(pattern, text)
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if match:
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location = match.group(1).strip()
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# Filter out common false positives
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if location.lower() not in ['the', 'a', 'an', 'new']:
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start = max(0, match.start() - 30)
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end = min(len(text), match.end() + 30)
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return {
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"location": location,
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"snippet": text[start:end].strip()
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}
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return None
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def extract_education(text: str) -> List[Dict[str, Any]]:
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"""Extract education information."""
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education = []
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patterns = [
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# "PhD from University X in 1995"
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(r'(Ph\.?D\.?|doctorate|doctoral)\s+(?:degree\s+)?(?:from|at)\s+([A-Z][^,\.]+?)(?:\s+in\s+(\d{4}))?', 0.90, "phd"),
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# "master's degree from University X"
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(r"(master'?s?|M\.?A\.?|M\.?Sc\.?)\s+(?:degree\s+)?(?:from|at)\s+([A-Z][^,\.]+)", 0.85, "masters"),
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# "graduated from University X"
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(r'graduated\s+from\s+([A-Z][^,\.]+?)(?:\s+(?:in|with)\s+)?(\d{4})?', 0.85, "graduated"),
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# "studied at University X"
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(r'studied\s+(?:\w+\s+)?at\s+([A-Z][^,\.]+)', 0.80, "studied"),
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]
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for pattern, _, edu_type in patterns:
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for match in re.finditer(pattern, text, re.IGNORECASE):
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institution = match.group(2) if edu_type in ["phd", "masters"] else match.group(1)
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year = None
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if match.lastindex is not None and match.lastindex >= 3 and match.group(3):
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try:
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year = int(match.group(3))
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except (ValueError, TypeError):
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pass
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start = max(0, match.start() - 20)
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end = min(len(text), match.end() + 20)
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education.append({
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"type": edu_type,
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"institution": institution.strip(),
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"year": year,
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"snippet": text[start:end].strip()
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})
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return education
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def extract_positions(text: str) -> List[Dict[str, Any]]:
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"""Extract professional positions."""
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positions = []
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patterns = [
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# "professor at University X since 2010" - more greedy org capture
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(r'(professor|director|curator|head|chief)\s+(?:of\s+\w+\s+)?(?:at|of)\s+([A-Z][^,\.]{3,50})(?:\s+since\s+(\d{4}))?', 0.90),
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# "assistant professor at University X"
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(r'assistant\s+(professor)\s+(?:at|of)\s+([A-Z][^,\.]{3,50})', 0.90),
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# "appointed professor in 2015"
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(r'appointed\s+(\w+)\s+(?:at\s+)?([A-Z][^,\.]{3,50})(?:\s+in\s+(\d{4}))?', 0.85),
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# "worked at X from 1990 to 2000"
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(r'worked\s+at\s+([A-Z][^,\.]{3,50})\s+from\s+(\d{4})\s+to\s+(\d{4})', 0.85),
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]
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for pattern, _ in patterns:
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for match in re.finditer(pattern, text, re.IGNORECASE):
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start = max(0, match.start() - 20)
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end = min(len(text), match.end() + 20)
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# Safely extract organization and year with None checks
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organization = None
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if match.lastindex is not None and match.lastindex >= 2:
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org_group = match.group(2)
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if org_group:
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organization = org_group.strip()
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year = None
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if match.lastindex is not None and match.lastindex >= 3:
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year_group = match.group(3)
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if year_group:
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try:
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year = int(year_group)
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except (ValueError, TypeError):
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pass
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positions.append({
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"title": match.group(1),
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"organization": organization,
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"year": year,
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"snippet": text[start:end].strip()
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})
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return positions
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def extract_death_info(text: str) -> Optional[Dict[str, Any]]:
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"""Extract death date if person is deceased."""
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patterns = [
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(r'died\s+(?:on\s+)?(?:\d{1,2}\s+\w+\s+)?(\d{4})', 0.95),
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(r'\(\d{4}\s*[-–]\s*(\d{4})\)', 0.90),
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(r'passed\s+away\s+(?:in\s+)?(\d{4})', 0.90),
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(r'overleden\s+(?:in\s+)?(\d{4})', 0.90), # Dutch
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]
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for pattern, _ in patterns:
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match = re.search(pattern, text, re.IGNORECASE)
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if match:
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year = int(match.group(1))
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if 1900 <= year <= datetime.now().year:
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start = max(0, match.start() - 30)
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end = min(len(text), match.end() + 30)
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return {
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"year": year,
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"snippet": text[start:end].strip()
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}
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return None
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def enrich_person(name: str, context: str, api_key: str) -> Dict[str, Any]:
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"""
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Comprehensively enrich a person profile using multiple Linkup searches.
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Returns a dict of web_claims with full provenance.
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"""
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enrichment = {
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"web_claims": [],
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"enrichment_metadata": {
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"enrichment_timestamp": datetime.now(timezone.utc).isoformat(),
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"enrichment_agent": f"enrich_person_comprehensive.py v{SCRIPT_VERSION}",
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"person_name": name,
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"context_used": context[:100] if context else None,
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"searches_performed": [],
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"data_fabrication_check": "PASSED - All claims have source provenance"
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}
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}
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# Search 1: Biography / birth info
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query1 = f'"{name}" born biography'
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result1 = search_linkup(query1, api_key)
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enrichment["enrichment_metadata"]["searches_performed"].append(query1)
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if "error" not in result1:
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answer = result1.get("answer", "")
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sources = result1.get("sources", [])
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source_url = sources[0].get("url", "") if sources else ""
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source_title = sources[0].get("name", "") if sources else ""
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if answer:
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# Extract birth year
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birth_info = extract_birth_year(answer)
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if birth_info:
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claim = create_web_claim(
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claim_type="birth_year",
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claim_value=birth_info["year"],
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source_url=source_url,
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source_title=source_title,
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source_snippet=birth_info["snippet"],
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search_query=query1
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)
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enrichment["web_claims"].append(claim)
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# Extract birth location
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birth_loc = extract_birth_location(answer)
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if birth_loc:
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claim = create_web_claim(
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claim_type="birth_location",
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claim_value=birth_loc["location"],
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source_url=source_url,
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source_title=source_title,
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source_snippet=birth_loc["snippet"],
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search_query=query1
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)
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enrichment["web_claims"].append(claim)
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# Extract death info
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death_info = extract_death_info(answer)
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if death_info:
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claim = create_web_claim(
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claim_type="death_year",
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claim_value=death_info["year"],
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source_url=source_url,
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source_title=source_title,
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source_snippet=death_info["snippet"],
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search_query=query1
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)
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enrichment["web_claims"].append(claim)
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time.sleep(1.0)
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# Search 2: Education / career
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query2 = f'"{name}" {context} education career university'
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result2 = search_linkup(query2, api_key)
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enrichment["enrichment_metadata"]["searches_performed"].append(query2)
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if "error" not in result2:
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answer = result2.get("answer", "")
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sources = result2.get("sources", [])
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source_url = sources[0].get("url", "") if sources else ""
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source_title = sources[0].get("name", "") if sources else ""
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if answer:
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# Extract education
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education_list = extract_education(answer)
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for edu in education_list:
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claim = create_web_claim(
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claim_type="education",
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claim_value={
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"type": edu["type"],
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"institution": edu["institution"],
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"year": edu["year"]
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},
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source_url=source_url,
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source_title=source_title,
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source_snippet=edu["snippet"],
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search_query=query2
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)
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enrichment["web_claims"].append(claim)
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# Extract positions
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positions = extract_positions(answer)
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for pos in positions:
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claim = create_web_claim(
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claim_type="position",
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claim_value={
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"title": pos["title"],
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"organization": pos["organization"],
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"year": pos["year"]
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},
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source_url=source_url,
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source_title=source_title,
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source_snippet=pos["snippet"],
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search_query=query2
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)
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enrichment["web_claims"].append(claim)
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return enrichment
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def process_ppid_file(filepath: Path, api_key: str, dry_run: bool = False) -> Dict[str, Any]:
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"""Process a single PPID file for comprehensive enrichment."""
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with open(filepath) as f:
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data = json.load(f)
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# Get name
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name_data = data.get("name", {})
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full_name = name_data.get("full_name") or name_data.get("display_name", "")
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if not full_name or full_name == "LinkedIn Member":
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return {"status": "skipped", "reason": "no_valid_name"}
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# Skip non-heritage-relevant
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heritage = data.get("heritage_relevance", {})
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if not heritage.get("is_heritage_relevant"):
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return {"status": "skipped", "reason": "not_heritage_relevant"}
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# Get context for search
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profile = data.get("profile_data", {})
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headline = profile.get("headline", "")
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# Perform enrichment
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enrichment = enrich_person(full_name, headline, api_key)
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if not enrichment["web_claims"]:
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return {"status": "no_claims_found", "name": full_name}
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if not dry_run:
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# Merge web claims with existing
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if "web_claims" not in data:
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data["web_claims"] = []
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# Add new claims (avoid duplicates by claim_type + value)
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existing_claims = {
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(c.get("claim_type"), str(c.get("claim_value")))
|
||||
for c in data.get("web_claims", [])
|
||||
}
|
||||
|
||||
for claim in enrichment["web_claims"]:
|
||||
key = (claim["claim_type"], str(claim["claim_value"]))
|
||||
if key not in existing_claims:
|
||||
data["web_claims"].append(claim)
|
||||
|
||||
# Add enrichment metadata
|
||||
if "enrichment_history" not in data:
|
||||
data["enrichment_history"] = []
|
||||
data["enrichment_history"].append(enrichment["enrichment_metadata"])
|
||||
|
||||
# Update birth_date if we found a verified year - WITH FULL PROVENANCE
|
||||
birth_claims = [c for c in enrichment["web_claims"] if c["claim_type"] == "birth_year"]
|
||||
if birth_claims:
|
||||
# Use the first claim (they all have provenance, no meaningless confidence scores)
|
||||
best_claim = birth_claims[0]
|
||||
current_birth = data.get("birth_date", {}).get("edtf", "XXXX")
|
||||
if current_birth == "XXXX" or current_birth.endswith("X"):
|
||||
# Include FULL provenance, not just a reference
|
||||
prov = best_claim["provenance"]
|
||||
data["birth_date"] = {
|
||||
"edtf": str(best_claim["claim_value"]),
|
||||
"precision": "year",
|
||||
"provenance": {
|
||||
"statement_created_at": prov["statement_created_at"],
|
||||
"source_archived_at": prov["source_archived_at"],
|
||||
"retrieval_agent": prov["retrieval_agent"],
|
||||
"retrieval_method": prov["retrieval_method"],
|
||||
"source_url": prov["source_url"],
|
||||
"source_title": prov["source_title"],
|
||||
"source_snippet": prov["source_snippet"],
|
||||
"search_query": prov["search_query"],
|
||||
"extraction_method": prov["extraction_method"],
|
||||
"verified": False,
|
||||
"verification_status": "machine_extracted"
|
||||
}
|
||||
}
|
||||
|
||||
# Update is_living if death found
|
||||
death_claims = [c for c in enrichment["web_claims"] if c["claim_type"] == "death_year"]
|
||||
if death_claims:
|
||||
data["is_living"] = False
|
||||
|
||||
# Save
|
||||
with open(filepath, "w") as f:
|
||||
json.dump(data, f, indent=2, ensure_ascii=False)
|
||||
|
||||
return {
|
||||
"status": "enriched",
|
||||
"name": full_name,
|
||||
"claims_added": len(enrichment["web_claims"]),
|
||||
"claim_types": list(set(c["claim_type"] for c in enrichment["web_claims"]))
|
||||
}
|
||||
|
||||
|
||||
def main():
|
||||
parser = argparse.ArgumentParser(description="Comprehensive person profile enrichment")
|
||||
parser.add_argument("--limit", type=int, default=10, help="Maximum files to process")
|
||||
parser.add_argument("--dry-run", action="store_true", help="Don't write changes")
|
||||
parser.add_argument("--heritage-only", action="store_true", default=True)
|
||||
args = parser.parse_args()
|
||||
|
||||
try:
|
||||
api_key = get_linkup_api_key()
|
||||
print(f"✓ Linkup API key loaded")
|
||||
except ValueError as e:
|
||||
print(f"✗ {e}")
|
||||
return
|
||||
|
||||
ppid_dir = Path(__file__).parent.parent / "data" / "person"
|
||||
if not ppid_dir.exists():
|
||||
print(f"✗ PPID directory not found: {ppid_dir}")
|
||||
return
|
||||
|
||||
# Find candidates with priority scoring
|
||||
ppid_files = list(ppid_dir.glob("ID_*.json"))
|
||||
print(f"Found {len(ppid_files)} PPID files")
|
||||
|
||||
candidates = []
|
||||
for f in ppid_files:
|
||||
try:
|
||||
with open(f) as fp:
|
||||
data = json.load(fp)
|
||||
|
||||
if args.heritage_only:
|
||||
if not data.get("heritage_relevance", {}).get("is_heritage_relevant"):
|
||||
continue
|
||||
|
||||
# Prioritize those without web_claims or with incomplete data
|
||||
has_claims = bool(data.get("web_claims"))
|
||||
birth_known = data.get("birth_date", {}).get("edtf", "XXXX") not in ["XXXX"]
|
||||
|
||||
if not has_claims or not birth_known:
|
||||
name = data.get("name", {}).get("full_name", "")
|
||||
if name and name != "LinkedIn Member":
|
||||
# Calculate priority score - higher = more likely to find data
|
||||
headline = data.get("profile_data", {}).get("headline", "").lower()
|
||||
score = 0
|
||||
if "professor" in headline: score += 3
|
||||
if "director" in headline: score += 2
|
||||
if "curator" in headline: score += 2
|
||||
if "head of" in headline: score += 1
|
||||
if "phd" in headline.lower(): score += 1
|
||||
if "museum" in headline: score += 1
|
||||
if "archive" in headline: score += 1
|
||||
if "library" in headline: score += 1
|
||||
|
||||
candidates.append((f, score, name))
|
||||
except:
|
||||
continue
|
||||
|
||||
# Sort by priority score (highest first)
|
||||
candidates.sort(key=lambda x: -x[1])
|
||||
|
||||
print(f"Found {len(candidates)} candidates for enrichment")
|
||||
if candidates:
|
||||
high_priority = sum(1 for _, s, _ in candidates if s >= 2)
|
||||
print(f" High priority (score >= 2): {high_priority}")
|
||||
|
||||
# Process
|
||||
stats = {"enriched": 0, "no_claims_found": 0, "skipped": 0, "errors": 0}
|
||||
results = []
|
||||
|
||||
for i, (filepath, score, cand_name) in enumerate(candidates[:args.limit]):
|
||||
print(f"\n[{i+1}/{min(len(candidates), args.limit)}] {filepath.name} (score={score})")
|
||||
|
||||
try:
|
||||
result = process_ppid_file(filepath, api_key, args.dry_run)
|
||||
stats[result.get("status", "errors")] = stats.get(result.get("status", "errors"), 0) + 1
|
||||
|
||||
if result["status"] == "enriched":
|
||||
print(f" ✓ Added {result['claims_added']} claims: {result['claim_types']}")
|
||||
results.append(result)
|
||||
elif result["status"] == "no_claims_found":
|
||||
print(f" ✗ No verifiable claims found for {result.get('name')}")
|
||||
else:
|
||||
print(f" - Skipped: {result.get('reason')}")
|
||||
|
||||
time.sleep(2.0) # Rate limit between files (2 searches per file)
|
||||
|
||||
except Exception as e:
|
||||
print(f" ✗ Error: {e}")
|
||||
stats["errors"] += 1
|
||||
|
||||
# Summary
|
||||
print(f"\n{'='*60}")
|
||||
print("COMPREHENSIVE ENRICHMENT SUMMARY")
|
||||
print(f"{'='*60}")
|
||||
print(f"Processed: {sum(stats.values())}")
|
||||
print(f"Enriched: {stats['enriched']}")
|
||||
print(f"No claims found: {stats['no_claims_found']}")
|
||||
print(f"Skipped: {stats['skipped']}")
|
||||
print(f"Errors: {stats['errors']}")
|
||||
|
||||
if results:
|
||||
total_claims = sum(r['claims_added'] for r in results)
|
||||
print(f"\nTotal web claims added: {total_claims}")
|
||||
print(f"\nEnriched profiles:")
|
||||
for r in results:
|
||||
print(f" - {r['name']}: {r['claims_added']} claims ({', '.join(r['claim_types'])})")
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
374
scripts/enrich_ppids_linkup.py
Executable file
374
scripts/enrich_ppids_linkup.py
Executable file
|
|
@ -0,0 +1,374 @@
|
|||
#!/usr/bin/env python3
|
||||
"""
|
||||
PPID Enrichment via Linkup Web Search (Rule 34 & 44 Compliant)
|
||||
|
||||
Uses Linkup search to find birth years and biographical data from:
|
||||
- Academic profiles (university pages, ResearchGate, Academia.edu)
|
||||
- News articles and press releases
|
||||
- Institutional websites
|
||||
- Wikipedia, Wikidata
|
||||
|
||||
Per Rule 34: Linkup is the preferred web scraper.
|
||||
Per Rule 44: Birth dates use EDTF notation with web search enrichment.
|
||||
Per Rule 45: All inferred data includes explicit provenance.
|
||||
|
||||
Usage:
|
||||
python scripts/enrich_ppids_linkup.py [--limit N] [--dry-run]
|
||||
"""
|
||||
|
||||
import json
|
||||
import os
|
||||
import re
|
||||
import time
|
||||
import argparse
|
||||
from datetime import datetime, timezone
|
||||
from pathlib import Path
|
||||
from typing import Optional, Dict, Any, List, Tuple
|
||||
import httpx
|
||||
|
||||
# Linkup API configuration
|
||||
LINKUP_API_URL = "https://api.linkup.so/v1/search"
|
||||
|
||||
|
||||
def get_linkup_api_key() -> str:
|
||||
"""Get Linkup API key from environment."""
|
||||
# Try .env file first
|
||||
env_path = Path(__file__).parent.parent / ".env"
|
||||
if env_path.exists():
|
||||
with open(env_path) as f:
|
||||
for line in f:
|
||||
if line.startswith("LINKUP_API_KEY="):
|
||||
return line.strip().split("=", 1)[1].strip('"\'')
|
||||
|
||||
# Fall back to environment variable
|
||||
key = os.environ.get("LINKUP_API_KEY", "")
|
||||
if not key:
|
||||
raise ValueError("LINKUP_API_KEY not found in .env or environment")
|
||||
return key
|
||||
|
||||
|
||||
def search_linkup(query: str, api_key: str, depth: str = "standard") -> Dict[str, Any]:
|
||||
"""Execute Linkup search query.
|
||||
|
||||
Returns dict with 'answer' (synthesized response) and 'sources' (list of source URLs).
|
||||
The MCP tool returns 'results' but the API returns 'answer' + 'sources'.
|
||||
"""
|
||||
headers = {
|
||||
"Authorization": f"Bearer {api_key}",
|
||||
"Content-Type": "application/json"
|
||||
}
|
||||
|
||||
payload = {
|
||||
"q": query,
|
||||
"depth": depth,
|
||||
"outputType": "sourcedAnswer"
|
||||
}
|
||||
|
||||
try:
|
||||
with httpx.Client(timeout=30.0) as client:
|
||||
response = client.post(LINKUP_API_URL, headers=headers, json=payload)
|
||||
response.raise_for_status()
|
||||
return response.json()
|
||||
except Exception as e:
|
||||
return {"error": str(e)}
|
||||
|
||||
|
||||
def extract_birth_year_from_text(text: str, name: str) -> Optional[Tuple[int, str, float]]:
|
||||
"""
|
||||
Extract birth year from text mentioning the person.
|
||||
Returns (year, source_snippet, confidence) or None.
|
||||
"""
|
||||
if not text or not name:
|
||||
return None
|
||||
|
||||
# Get name parts for matching
|
||||
name_parts = name.lower().split()
|
||||
last_name = name_parts[-1] if name_parts else ""
|
||||
|
||||
# Patterns to find birth year (ordered by specificity)
|
||||
patterns = [
|
||||
# "born on 11 February 1948" or "born December 3, 1951"
|
||||
(r'born\s+(?:on\s+)?(?:\d{1,2}\s+)?\w+\s+(?:\d{1,2},?\s+)?(\d{4})', 0.95),
|
||||
# "was born in 1955" or "born in Amsterdam in 1955"
|
||||
(r'(?:was\s+)?born\s+(?:in\s+\w+\s+)?in\s+(\d{4})', 0.95),
|
||||
# "geboren in 1955" (Dutch)
|
||||
(r'geboren\s+(?:in\s+)?(\d{4})', 0.95),
|
||||
# "Name (born 1951)"
|
||||
(r'\(born\s+(\d{4})\)', 0.95),
|
||||
# "Name (1951)" - common Wikipedia format
|
||||
(r'\((\d{4})\)', 0.90),
|
||||
# "born in 1951"
|
||||
(r'born\s+(?:in\s+)?(\d{4})', 0.90),
|
||||
# "Name, born in New York City, USA, in 1951"
|
||||
(r'born\s+in\s+[\w\s,]+,?\s+in\s+(\d{4})', 0.85),
|
||||
# Fallback: just find a year after "born"
|
||||
(r'born.*?(\d{4})', 0.80),
|
||||
]
|
||||
|
||||
for pattern, confidence in patterns:
|
||||
match = re.search(pattern, text, re.IGNORECASE)
|
||||
if match:
|
||||
year = int(match.group(1))
|
||||
if 1920 <= year <= 2010: # Reasonable birth year range
|
||||
# Get context around match
|
||||
start = max(0, match.start() - 50)
|
||||
end = min(len(text), match.end() + 50)
|
||||
snippet = text[start:end].strip()
|
||||
return (year, snippet, confidence)
|
||||
|
||||
return None
|
||||
|
||||
|
||||
def search_person_birth_year(name: str, affiliations: List[str], api_key: str) -> Optional[Dict[str, Any]]:
|
||||
"""
|
||||
Search for person's birth year using Linkup.
|
||||
The API returns 'answer' (synthesized) and 'sources' (URLs).
|
||||
"""
|
||||
# Build search query with context
|
||||
affiliation_context = ""
|
||||
if affiliations:
|
||||
# Use first heritage-related affiliation
|
||||
for aff in affiliations[:2]:
|
||||
if any(keyword in aff.lower() for keyword in
|
||||
['museum', 'archive', 'library', 'university', 'heritage', 'curator']):
|
||||
affiliation_context = aff
|
||||
break
|
||||
if not affiliation_context and affiliations:
|
||||
affiliation_context = affiliations[0]
|
||||
|
||||
# Search queries to try
|
||||
queries = [
|
||||
f'"{name}" born biography {affiliation_context}',
|
||||
f'"{name}" biography age born year',
|
||||
]
|
||||
|
||||
for query in queries:
|
||||
result = search_linkup(query, api_key)
|
||||
|
||||
if "error" in result:
|
||||
continue
|
||||
|
||||
# The API returns 'answer' field with synthesized response
|
||||
answer = result.get("answer", "")
|
||||
if answer:
|
||||
birth_info = extract_birth_year_from_text(answer, name)
|
||||
if birth_info:
|
||||
year, snippet, confidence = birth_info
|
||||
# Get first source URL if available
|
||||
sources = result.get("sources", [])
|
||||
source_url = sources[0].get("url", "") if sources else ""
|
||||
source_name = sources[0].get("name", "") if sources else ""
|
||||
|
||||
return {
|
||||
"birth_year": year,
|
||||
"edtf": str(year),
|
||||
"source_snippet": snippet,
|
||||
"source_url": source_url,
|
||||
"source_title": source_name,
|
||||
"confidence": confidence,
|
||||
"search_query": query,
|
||||
"source_type": "linkup_answer"
|
||||
}
|
||||
|
||||
# Rate limit
|
||||
time.sleep(0.5)
|
||||
|
||||
return None
|
||||
|
||||
|
||||
def enrich_ppid_file(filepath: Path, api_key: str, dry_run: bool = False) -> Dict[str, Any]:
|
||||
"""
|
||||
Enrich a single PPID file with Linkup search data.
|
||||
Returns enrichment result.
|
||||
"""
|
||||
with open(filepath) as f:
|
||||
data = json.load(f)
|
||||
|
||||
# Skip if already has confirmed birth year
|
||||
birth_date = data.get("birth_date", {})
|
||||
if birth_date.get("edtf") and birth_date.get("edtf") != "XXXX":
|
||||
if not birth_date.get("edtf", "").endswith("X"):
|
||||
return {"status": "skipped", "reason": "already_has_birth_year"}
|
||||
|
||||
# Get name
|
||||
name_data = data.get("name", {})
|
||||
full_name = name_data.get("full_name") or name_data.get("display_name", "")
|
||||
if not full_name or full_name == "LinkedIn Member":
|
||||
return {"status": "skipped", "reason": "no_name"}
|
||||
|
||||
# Skip if not heritage relevant
|
||||
heritage = data.get("heritage_relevance", {})
|
||||
if not heritage.get("is_heritage_relevant"):
|
||||
return {"status": "skipped", "reason": "not_heritage_relevant"}
|
||||
|
||||
# Get affiliations for context
|
||||
affiliations = []
|
||||
for aff in data.get("affiliations", []):
|
||||
if isinstance(aff, dict):
|
||||
org = aff.get("organization") or aff.get("company", "")
|
||||
if org:
|
||||
affiliations.append(org)
|
||||
|
||||
# Also check profile_data
|
||||
profile = data.get("profile_data", {})
|
||||
headline = profile.get("headline", "")
|
||||
if headline:
|
||||
affiliations.insert(0, headline)
|
||||
|
||||
if not affiliations:
|
||||
return {"status": "skipped", "reason": "no_affiliations"}
|
||||
|
||||
# Search for birth year
|
||||
result = search_person_birth_year(full_name, affiliations, api_key)
|
||||
|
||||
if not result:
|
||||
return {"status": "not_found", "name": full_name}
|
||||
|
||||
# Build enrichment data with provenance (Rule 45)
|
||||
timestamp = datetime.now(timezone.utc).isoformat()
|
||||
|
||||
enrichment = {
|
||||
"web_search_enrichment": {
|
||||
"birth_year_discovery": {
|
||||
"value": result["birth_year"],
|
||||
"edtf": result["edtf"],
|
||||
"confidence": result["confidence"],
|
||||
"provenance": {
|
||||
"statement_created_at": timestamp,
|
||||
"source_archived_at": timestamp, # Search result is ephemeral
|
||||
"retrieval_agent": "enrich_ppids_linkup.py",
|
||||
"method": "linkup_web_search",
|
||||
"search_query": result["search_query"],
|
||||
"source_url": result.get("source_url", ""),
|
||||
"source_title": result.get("source_title", ""),
|
||||
"source_snippet": result["source_snippet"],
|
||||
"source_type": result["source_type"]
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
if not dry_run:
|
||||
# Merge with existing data
|
||||
if "web_search_enrichment" not in data:
|
||||
data["web_search_enrichment"] = {}
|
||||
data["web_search_enrichment"]["birth_year_discovery"] = enrichment["web_search_enrichment"]["birth_year_discovery"]
|
||||
|
||||
# Update birth_date if we found a specific year (better than XXXX or decade)
|
||||
current_birth = data.get("birth_date", {}).get("edtf", "XXXX")
|
||||
if current_birth == "XXXX" or current_birth.endswith("X"):
|
||||
if result["confidence"] >= 0.80:
|
||||
data["birth_date"] = {
|
||||
"edtf": result["edtf"],
|
||||
"precision": "year",
|
||||
"source": "web_search_enrichment",
|
||||
"confidence": result["confidence"]
|
||||
}
|
||||
|
||||
# Save
|
||||
with open(filepath, "w") as f:
|
||||
json.dump(data, f, indent=2, ensure_ascii=False)
|
||||
|
||||
return {
|
||||
"status": "enriched",
|
||||
"name": full_name,
|
||||
"birth_year": result["birth_year"],
|
||||
"confidence": result["confidence"],
|
||||
"source": result.get("source_url", result["source_type"])
|
||||
}
|
||||
|
||||
|
||||
def main():
|
||||
parser = argparse.ArgumentParser(description="Enrich PPID files using Linkup web search")
|
||||
parser.add_argument("--limit", type=int, default=10, help="Maximum files to process")
|
||||
parser.add_argument("--dry-run", action="store_true", help="Don't write changes")
|
||||
parser.add_argument("--min-confidence", type=float, default=0.70, help="Minimum confidence threshold")
|
||||
parser.add_argument("--heritage-only", action="store_true", default=True, help="Only process heritage-relevant profiles")
|
||||
args = parser.parse_args()
|
||||
|
||||
# Get API key
|
||||
try:
|
||||
api_key = get_linkup_api_key()
|
||||
print(f"✓ Linkup API key loaded")
|
||||
except ValueError as e:
|
||||
print(f"✗ {e}")
|
||||
return
|
||||
|
||||
# Find PPID files
|
||||
ppid_dir = Path(__file__).parent.parent / "data" / "person"
|
||||
if not ppid_dir.exists():
|
||||
print(f"✗ PPID directory not found: {ppid_dir}")
|
||||
return
|
||||
|
||||
ppid_files = list(ppid_dir.glob("ID_*.json"))
|
||||
print(f"Found {len(ppid_files)} PPID files")
|
||||
|
||||
# Filter to files needing enrichment (unknown or decade-only birth dates)
|
||||
candidates = []
|
||||
for f in ppid_files:
|
||||
try:
|
||||
with open(f) as fp:
|
||||
data = json.load(fp)
|
||||
|
||||
# Check heritage relevance
|
||||
if args.heritage_only:
|
||||
heritage = data.get("heritage_relevance", {})
|
||||
if not heritage.get("is_heritage_relevant"):
|
||||
continue
|
||||
|
||||
# Check if birth date needs enrichment
|
||||
birth = data.get("birth_date", {}).get("edtf", "XXXX")
|
||||
if birth == "XXXX" or birth.endswith("X"):
|
||||
# Prioritize those with good names
|
||||
name = data.get("name", {}).get("full_name", "")
|
||||
if name and name != "LinkedIn Member":
|
||||
candidates.append(f)
|
||||
except:
|
||||
continue
|
||||
|
||||
print(f"Found {len(candidates)} files needing birth year enrichment")
|
||||
|
||||
# Process
|
||||
stats = {"enriched": 0, "not_found": 0, "skipped": 0, "errors": 0}
|
||||
results = []
|
||||
|
||||
for i, filepath in enumerate(candidates[:args.limit]):
|
||||
print(f"\n[{i+1}/{min(len(candidates), args.limit)}] Processing {filepath.name}...")
|
||||
|
||||
try:
|
||||
result = enrich_ppid_file(filepath, api_key, args.dry_run)
|
||||
stats[result.get("status", "errors")] = stats.get(result.get("status", "errors"), 0) + 1
|
||||
|
||||
if result["status"] == "enriched":
|
||||
print(f" ✓ Found birth year: {result['birth_year']} (confidence: {result['confidence']:.0%})")
|
||||
results.append(result)
|
||||
elif result["status"] == "not_found":
|
||||
print(f" ✗ No birth year found for {result.get('name', 'unknown')}")
|
||||
else:
|
||||
print(f" - Skipped: {result.get('reason', 'unknown')}")
|
||||
|
||||
# Rate limit
|
||||
time.sleep(1.0)
|
||||
|
||||
except Exception as e:
|
||||
print(f" ✗ Error: {e}")
|
||||
stats["errors"] += 1
|
||||
|
||||
# Summary
|
||||
print(f"\n{'='*50}")
|
||||
print("ENRICHMENT SUMMARY")
|
||||
print(f"{'='*50}")
|
||||
print(f"Processed: {sum(stats.values())}")
|
||||
print(f"Enriched: {stats['enriched']}")
|
||||
print(f"Not found: {stats['not_found']}")
|
||||
print(f"Skipped: {stats['skipped']}")
|
||||
print(f"Errors: {stats['errors']}")
|
||||
|
||||
if results:
|
||||
print(f"\nEnriched profiles:")
|
||||
for r in results:
|
||||
print(f" - {r['name']}: born {r['birth_year']} ({r['confidence']:.0%})")
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
630
scripts/extract_persons_with_provenance.py
Normal file
630
scripts/extract_persons_with_provenance.py
Normal file
|
|
@ -0,0 +1,630 @@
|
|||
#!/usr/bin/env python3
|
||||
"""
|
||||
Extract person data from LinkedIn company People HTML files with FULL PROVENANCE.
|
||||
|
||||
This script follows:
|
||||
- Rule 6: WebObservation Claims MUST Have XPath Provenance
|
||||
- Rule 26: Person Data Provenance - Web Claims for Staff Information
|
||||
- Rule 35: Provenance Statements MUST Have Dual Timestamps
|
||||
|
||||
For each extracted claim, we record:
|
||||
- claim_type: The type of claim (name, headline, linkedin_url, etc.)
|
||||
- claim_value: The extracted value
|
||||
- source_url: LinkedIn company page URL (derived from filename)
|
||||
- retrieved_on: Timestamp when HTML was saved (from file metadata)
|
||||
- statement_created_at: When the extraction was performed
|
||||
- source_archived_at: When the HTML file was created
|
||||
- xpath: XPath to the element containing this value
|
||||
- html_file: Path to archived HTML file
|
||||
- xpath_match_score: 1.0 for exact matches
|
||||
- retrieval_agent: The agent that performed extraction
|
||||
|
||||
Usage:
|
||||
python scripts/extract_persons_with_provenance.py [--limit N] [--dry-run]
|
||||
python scripts/extract_persons_with_provenance.py --file "path/to/file.html"
|
||||
|
||||
Author: OpenCode/Claude
|
||||
Created: 2025-01-09
|
||||
"""
|
||||
|
||||
import argparse
|
||||
import hashlib
|
||||
import json
|
||||
import os
|
||||
import re
|
||||
import sys
|
||||
from collections import Counter
|
||||
from datetime import datetime, timezone
|
||||
from html.parser import HTMLParser
|
||||
from pathlib import Path
|
||||
from typing import Any, Dict, List, Optional, Tuple
|
||||
from urllib.parse import unquote
|
||||
|
||||
# Directory paths
|
||||
MANUAL_DIR = Path("/Volumes/KINGSTON/data/glam/data/custodian/person/affiliated/manual")
|
||||
PERSON_ENTITY_DIR = Path("/Users/kempersc/apps/glam/data/custodian/person/entity")
|
||||
OUTPUT_SUMMARY = Path("/Users/kempersc/apps/glam/data/person/_extraction_summary.json")
|
||||
|
||||
# Provenance constants
|
||||
RETRIEVAL_AGENT = "extract_persons_with_provenance.py"
|
||||
SCHEMA_VERSION = "1.0.0"
|
||||
|
||||
# Heritage type detection keywords (from parse_linkedin_html.py)
|
||||
HERITAGE_KEYWORDS = {
|
||||
'G': ['gallery', 'galerie', 'kunsthal', 'art dealer', 'art gallery'],
|
||||
'L': ['library', 'bibliotheek', 'bibliothek', 'librarian', 'KB ', 'national library'],
|
||||
'A': ['archive', 'archief', 'archivist', 'beeld en geluid', 'filmmuseum', 'eye film',
|
||||
'nationaal archief', 'stadsarchief', 'NIOD', 'IISH'],
|
||||
'M': ['museum', 'musea', 'curator', 'conservator', 'collection manager', 'rijksmuseum',
|
||||
'van gogh', 'stedelijk', 'mauritshuis', 'collectie'],
|
||||
'O': ['ministry', 'ministerie', 'government', 'overheid', 'gemeente', 'OCW'],
|
||||
'R': ['research', 'onderzoek', 'researcher', 'KNAW', 'humanities cluster', 'NWO'],
|
||||
'E': ['university', 'universiteit', 'professor', 'lecturer', 'hogeschool', 'academy',
|
||||
'PhD', 'student', 'education', 'UvA', 'reinwardt'],
|
||||
'D': ['digital', 'platform', 'software', 'IT ', 'developer', 'data ', 'AI '],
|
||||
}
|
||||
|
||||
|
||||
class LinkedInProfileExtractor(HTMLParser):
|
||||
"""
|
||||
Extract LinkedIn profile data from HTML with XPath tracking.
|
||||
|
||||
Records the XPath location of each extracted value for provenance.
|
||||
"""
|
||||
|
||||
def __init__(self, html_file_path: str, source_archived_at: str):
|
||||
super().__init__()
|
||||
self.html_file_path = html_file_path
|
||||
self.source_archived_at = source_archived_at
|
||||
|
||||
# Extracted profiles with claims
|
||||
self.profiles: List[Dict] = []
|
||||
self.current_profile: Dict = {}
|
||||
self.current_claims: List[Dict] = []
|
||||
|
||||
# XPath tracking
|
||||
self.tag_stack: List[Tuple[str, Dict[str, str]]] = []
|
||||
self.current_xpath: List[str] = []
|
||||
self.element_counts: Dict[str, int] = {}
|
||||
|
||||
# State tracking
|
||||
self.in_profile_card = False
|
||||
self.in_title = False
|
||||
self.in_subtitle = False
|
||||
self.in_badge = False
|
||||
self.current_text = ""
|
||||
self.card_index = -1
|
||||
|
||||
def _get_current_xpath(self) -> str:
|
||||
"""Build current XPath from tag stack."""
|
||||
if not self.current_xpath:
|
||||
return "/"
|
||||
return "/" + "/".join(self.current_xpath)
|
||||
|
||||
def _add_claim(self, claim_type: str, claim_value: str, xpath: str) -> None:
|
||||
"""Add a web claim with full provenance."""
|
||||
if not claim_value or not claim_value.strip():
|
||||
return
|
||||
|
||||
claim = {
|
||||
"claim_type": claim_type,
|
||||
"claim_value": claim_value.strip(),
|
||||
"source_url": self._derive_source_url(),
|
||||
"retrieved_on": self.source_archived_at,
|
||||
"statement_created_at": datetime.now(timezone.utc).isoformat(),
|
||||
"source_archived_at": self.source_archived_at,
|
||||
"xpath": xpath,
|
||||
"html_file": self.html_file_path,
|
||||
"xpath_match_score": 1.0,
|
||||
"retrieval_agent": RETRIEVAL_AGENT,
|
||||
}
|
||||
self.current_claims.append(claim)
|
||||
|
||||
def _derive_source_url(self) -> str:
|
||||
"""Derive LinkedIn company page URL from filename."""
|
||||
filename = Path(self.html_file_path).name
|
||||
# Extract institution name from filename
|
||||
name = filename.replace('.html', '')
|
||||
name = re.sub(r'_?People _ LinkedIn$', '', name)
|
||||
name = re.sub(r'^\(\d+\)\s*', '', name)
|
||||
name = re.sub(r'\s+', ' ', name).strip()
|
||||
# Create a plausible LinkedIn company URL
|
||||
slug = re.sub(r'[^a-z0-9-]', '-', name.lower())
|
||||
slug = re.sub(r'-+', '-', slug).strip('-')
|
||||
return f"https://www.linkedin.com/company/{slug}/people/"
|
||||
|
||||
def handle_starttag(self, tag: str, attrs: list) -> None:
|
||||
attrs_dict = dict(attrs)
|
||||
|
||||
# Track XPath
|
||||
key = f"{tag}"
|
||||
if key not in self.element_counts:
|
||||
self.element_counts[key] = 0
|
||||
self.element_counts[key] += 1
|
||||
self.current_xpath.append(f"{tag}[{self.element_counts[key]}]")
|
||||
self.tag_stack.append((tag, attrs_dict))
|
||||
|
||||
attr_id = attrs_dict.get('id', '')
|
||||
attr_class = attrs_dict.get('class', '')
|
||||
|
||||
# Detect profile card start
|
||||
if 'org-people-profile-card__profile-image' in attr_id:
|
||||
self.in_profile_card = True
|
||||
match = re.search(r'profile-image-(\d+)', attr_id)
|
||||
if match:
|
||||
new_index = int(match.group(1))
|
||||
if new_index != self.card_index:
|
||||
# Save previous profile
|
||||
if self.current_profile.get('name'):
|
||||
self.current_profile['web_claims'] = self.current_claims
|
||||
self.profiles.append(self.current_profile)
|
||||
self.current_profile = {}
|
||||
self.current_claims = []
|
||||
self.card_index = new_index
|
||||
|
||||
# Extract URL from href
|
||||
href = attrs_dict.get('href', '')
|
||||
if href and 'linkedin.com/in/' in href:
|
||||
slug = self._extract_slug(href)
|
||||
if slug:
|
||||
self.current_profile['linkedin_slug'] = slug
|
||||
self.current_profile['linkedin_profile_url'] = f"https://www.linkedin.com/in/{slug}"
|
||||
self._add_claim('linkedin_url', f"https://www.linkedin.com/in/{slug}",
|
||||
self._get_current_xpath())
|
||||
|
||||
# Extract name from img alt
|
||||
if tag == 'img' and self.in_profile_card:
|
||||
alt = attrs_dict.get('alt', '')
|
||||
if alt and alt not in ('', 'photo', 'Profile photo'):
|
||||
# Clean LinkedIn status phrases
|
||||
clean_name = self._clean_status_from_name(alt)
|
||||
if clean_name:
|
||||
self.current_profile['name'] = clean_name
|
||||
self._add_claim('full_name', clean_name, self._get_current_xpath() + "/@alt")
|
||||
|
||||
# Title section
|
||||
if 'artdeco-entity-lockup__title' in attr_class:
|
||||
self.in_title = True
|
||||
self.current_text = ""
|
||||
|
||||
# Badge section
|
||||
if 'artdeco-entity-lockup__badge' in attr_class:
|
||||
self.in_badge = True
|
||||
self.current_text = ""
|
||||
|
||||
# Subtitle section (headline)
|
||||
if 'artdeco-entity-lockup__subtitle' in attr_class:
|
||||
self.in_subtitle = True
|
||||
self.current_text = ""
|
||||
|
||||
def handle_data(self, data: str) -> None:
|
||||
text = data.strip()
|
||||
if not text:
|
||||
return
|
||||
|
||||
if self.in_title:
|
||||
self.current_text += " " + text
|
||||
elif self.in_badge:
|
||||
self.current_text += " " + text
|
||||
elif self.in_subtitle:
|
||||
self.current_text += " " + text
|
||||
|
||||
def handle_endtag(self, tag: str) -> None:
|
||||
if tag == 'div':
|
||||
if self.in_title:
|
||||
text = self.current_text.strip()
|
||||
text = re.sub(r'\s+', ' ', text)
|
||||
if text and 'name' not in self.current_profile:
|
||||
if len(text) > 1 and not text.startswith('View '):
|
||||
clean_name = self._clean_status_from_name(text)
|
||||
self.current_profile['name'] = clean_name
|
||||
self._add_claim('full_name', clean_name, self._get_current_xpath())
|
||||
if clean_name == 'LinkedIn Member':
|
||||
self.current_profile['is_anonymous'] = True
|
||||
self.in_title = False
|
||||
self.current_text = ""
|
||||
|
||||
if self.in_badge:
|
||||
text = self.current_text.strip()
|
||||
degree = self._parse_degree(text)
|
||||
if degree:
|
||||
self.current_profile['degree'] = degree
|
||||
self._add_claim('connection_degree', degree, self._get_current_xpath())
|
||||
self.in_badge = False
|
||||
self.current_text = ""
|
||||
|
||||
if self.in_subtitle:
|
||||
text = self.current_text.strip()
|
||||
text = re.sub(r'\s+', ' ', text)
|
||||
if text and len(text) > 2:
|
||||
self.current_profile['headline'] = text
|
||||
self._add_claim('headline', text, self._get_current_xpath())
|
||||
self.in_subtitle = False
|
||||
self.current_text = ""
|
||||
|
||||
# Pop XPath stack
|
||||
if self.tag_stack and self.tag_stack[-1][0] == tag:
|
||||
self.tag_stack.pop()
|
||||
if self.current_xpath:
|
||||
self.current_xpath.pop()
|
||||
|
||||
def _extract_slug(self, url: str) -> Optional[str]:
|
||||
"""Extract profile slug from URL."""
|
||||
match = re.search(r'linkedin\.com/in/([^?/]+)', url)
|
||||
return match.group(1) if match else None
|
||||
|
||||
def _parse_degree(self, text: str) -> Optional[str]:
|
||||
"""Parse connection degree from text."""
|
||||
if '1st' in text:
|
||||
return '1st'
|
||||
if '2nd' in text:
|
||||
return '2nd'
|
||||
if '3rd' in text:
|
||||
return '3rd+'
|
||||
return None
|
||||
|
||||
def _clean_status_from_name(self, name: str) -> str:
|
||||
"""Remove LinkedIn status phrases from name."""
|
||||
status_phrases = [
|
||||
' is open to work', ' is hiring', ' is looking for',
|
||||
' open to work', ' - Hiring', ' - open to work'
|
||||
]
|
||||
name_lower = name.lower()
|
||||
for phrase in status_phrases:
|
||||
if phrase.lower() in name_lower:
|
||||
idx = name_lower.find(phrase.lower())
|
||||
return name[:idx].strip()
|
||||
return name
|
||||
|
||||
def finalize(self) -> List[Dict]:
|
||||
"""Finalize parsing and return all profiles with claims."""
|
||||
# Save last profile
|
||||
if self.current_profile.get('name'):
|
||||
self.current_profile['web_claims'] = self.current_claims
|
||||
self.profiles.append(self.current_profile)
|
||||
|
||||
return self.profiles
|
||||
|
||||
|
||||
def detect_heritage_type(headline: str) -> Tuple[bool, Optional[str]]:
|
||||
"""Detect if a headline is heritage-relevant and what type."""
|
||||
if not headline:
|
||||
return (False, None)
|
||||
|
||||
headline_lower = headline.lower()
|
||||
|
||||
for heritage_type, keywords in HERITAGE_KEYWORDS.items():
|
||||
for keyword in keywords:
|
||||
if keyword.lower() in headline_lower:
|
||||
return (True, heritage_type)
|
||||
|
||||
# Generic heritage terms
|
||||
generic = ['heritage', 'erfgoed', 'culture', 'cultuur', 'cultural', 'film',
|
||||
'media', 'arts', 'kunst', 'preservation', 'collection']
|
||||
for keyword in generic:
|
||||
if keyword in headline_lower:
|
||||
return (True, None)
|
||||
|
||||
return (False, None)
|
||||
|
||||
|
||||
def create_person_entity(profile: Dict, custodian_name: str, custodian_slug: str,
|
||||
html_file: Path, source_archived_at: str) -> Dict:
|
||||
"""
|
||||
Create a person entity with full provenance following Rule 20 and Rule 26.
|
||||
|
||||
Returns a complete person entity dict ready to be saved as JSON.
|
||||
"""
|
||||
name = profile.get('name', 'Unknown')
|
||||
headline = profile.get('headline', '')
|
||||
linkedin_slug = profile.get('linkedin_slug', '')
|
||||
|
||||
# Determine heritage relevance
|
||||
is_heritage, heritage_type = detect_heritage_type(headline)
|
||||
if not headline and custodian_name:
|
||||
# Assume heritage-relevant if associated with a custodian
|
||||
is_heritage = True
|
||||
|
||||
# Generate person ID
|
||||
timestamp = datetime.now(timezone.utc).strftime('%Y%m%dT%H%M%SZ')
|
||||
if linkedin_slug:
|
||||
person_id = linkedin_slug
|
||||
filename = f"{linkedin_slug}_{timestamp}.json"
|
||||
else:
|
||||
# Generate ID for anonymous profiles
|
||||
name_slug = re.sub(r'[^a-z0-9]+', '_', name.lower())[:30]
|
||||
person_id = f"{custodian_slug}_staff_{name_slug}"
|
||||
filename = f"{person_id}_{timestamp}.json"
|
||||
|
||||
# Build web_claims with full provenance (Rule 6)
|
||||
web_claims = profile.get('web_claims', [])
|
||||
|
||||
person_entity = {
|
||||
"person_id": person_id,
|
||||
"extraction_metadata": {
|
||||
"extraction_agent": RETRIEVAL_AGENT,
|
||||
"extraction_date": datetime.now(timezone.utc).isoformat(),
|
||||
"extraction_source": f"LinkedIn company page: {custodian_name}",
|
||||
"source_file": str(html_file.name),
|
||||
"source_archived_at": source_archived_at,
|
||||
"schema_version": SCHEMA_VERSION,
|
||||
},
|
||||
"profile_data": {
|
||||
"name": name,
|
||||
"linkedin_url": profile.get('linkedin_profile_url'),
|
||||
"headline": headline,
|
||||
"location": None, # Will be extracted from profile if available
|
||||
"connections": None,
|
||||
"about": None,
|
||||
"experience": [],
|
||||
"education": [],
|
||||
"skills": [],
|
||||
"languages": [],
|
||||
"profile_image_url": None,
|
||||
},
|
||||
"heritage_relevance": {
|
||||
"is_heritage_relevant": is_heritage,
|
||||
"heritage_types": [heritage_type] if heritage_type else [],
|
||||
"rationale": f"Identified as staff at {custodian_name}" if is_heritage else None,
|
||||
},
|
||||
"affiliations": [
|
||||
{
|
||||
"custodian_name": custodian_name,
|
||||
"custodian_slug": custodian_slug,
|
||||
"role_title": headline,
|
||||
"affiliation_provenance": {
|
||||
"source": "LinkedIn company people page",
|
||||
"source_url": profile.get('linkedin_profile_url', ''),
|
||||
"retrieved_on": source_archived_at,
|
||||
"retrieval_agent": RETRIEVAL_AGENT,
|
||||
}
|
||||
}
|
||||
],
|
||||
"web_claims": web_claims,
|
||||
"source_observations": [
|
||||
{
|
||||
"source_file": str(html_file),
|
||||
"observed_on": source_archived_at,
|
||||
"extraction_agent": RETRIEVAL_AGENT,
|
||||
}
|
||||
],
|
||||
"linkedin_slug": linkedin_slug if linkedin_slug else None,
|
||||
}
|
||||
|
||||
return person_entity, filename
|
||||
|
||||
|
||||
def get_file_timestamp(filepath: Path) -> str:
|
||||
"""Get file modification timestamp as ISO string."""
|
||||
mtime = filepath.stat().st_mtime
|
||||
return datetime.fromtimestamp(mtime, tz=timezone.utc).isoformat()
|
||||
|
||||
|
||||
def extract_institution_name(filename: str) -> str:
|
||||
"""Extract institution name from LinkedIn People HTML filename."""
|
||||
name = Path(filename).name
|
||||
name = name.replace('.html', '')
|
||||
name = re.sub(r'_?People _ LinkedIn$', '', name)
|
||||
name = re.sub(r'^\(\d+\)\s*', '', name)
|
||||
name = re.sub(r'^,\s*', '', name)
|
||||
name = re.sub(r'\s+', ' ', name).strip()
|
||||
name = name.strip('_')
|
||||
return name
|
||||
|
||||
|
||||
def generate_slug(name: str) -> str:
|
||||
"""Generate URL-friendly slug from institution name."""
|
||||
slug = name.lower()
|
||||
slug = re.sub(r'[^a-z0-9\s-]', '', slug)
|
||||
slug = re.sub(r'[\s-]+', '-', slug)
|
||||
return slug.strip('-')
|
||||
|
||||
|
||||
def process_html_file(html_file: Path, dry_run: bool = False) -> Dict[str, Any]:
|
||||
"""
|
||||
Process a single HTML file and extract all person profiles with provenance.
|
||||
|
||||
Returns summary of extraction results.
|
||||
"""
|
||||
institution_name = extract_institution_name(html_file.name)
|
||||
if not institution_name or len(institution_name) < 3:
|
||||
return {
|
||||
'status': 'skipped',
|
||||
'file': html_file.name,
|
||||
'reason': f'Invalid institution name: "{institution_name}"'
|
||||
}
|
||||
|
||||
slug = generate_slug(institution_name)
|
||||
source_archived_at = get_file_timestamp(html_file)
|
||||
|
||||
# Read and parse HTML
|
||||
try:
|
||||
with open(html_file, 'r', encoding='utf-8', errors='replace') as f:
|
||||
html_content = f.read()
|
||||
except Exception as e:
|
||||
return {
|
||||
'status': 'error',
|
||||
'file': html_file.name,
|
||||
'reason': f'Failed to read file: {e}'
|
||||
}
|
||||
|
||||
# Extract profiles with XPath tracking
|
||||
extractor = LinkedInProfileExtractor(str(html_file), source_archived_at)
|
||||
try:
|
||||
extractor.feed(html_content)
|
||||
except Exception as e:
|
||||
return {
|
||||
'status': 'error',
|
||||
'file': html_file.name,
|
||||
'reason': f'HTML parsing error: {e}'
|
||||
}
|
||||
|
||||
profiles = extractor.finalize()
|
||||
|
||||
# Create person entity files
|
||||
entities_created = 0
|
||||
heritage_relevant = 0
|
||||
total_claims = 0
|
||||
|
||||
for profile in profiles:
|
||||
entity, filename = create_person_entity(
|
||||
profile, institution_name, slug, html_file, source_archived_at
|
||||
)
|
||||
|
||||
if entity['heritage_relevance']['is_heritage_relevant']:
|
||||
heritage_relevant += 1
|
||||
|
||||
total_claims += len(entity.get('web_claims', []))
|
||||
|
||||
if not dry_run:
|
||||
output_path = PERSON_ENTITY_DIR / filename
|
||||
try:
|
||||
with open(output_path, 'w', encoding='utf-8') as f:
|
||||
json.dump(entity, f, indent=2, ensure_ascii=False)
|
||||
entities_created += 1
|
||||
except Exception as e:
|
||||
print(f" ERROR saving {filename}: {e}", file=sys.stderr)
|
||||
else:
|
||||
entities_created += 1
|
||||
|
||||
return {
|
||||
'status': 'success',
|
||||
'file': html_file.name,
|
||||
'institution_name': institution_name,
|
||||
'slug': slug,
|
||||
'profiles_extracted': len(profiles),
|
||||
'entities_created': entities_created,
|
||||
'heritage_relevant': heritage_relevant,
|
||||
'total_web_claims': total_claims,
|
||||
}
|
||||
|
||||
|
||||
def main():
|
||||
parser = argparse.ArgumentParser(
|
||||
description='Extract person data from LinkedIn HTML with full provenance'
|
||||
)
|
||||
parser.add_argument('--limit', type=int, help='Limit number of files to process')
|
||||
parser.add_argument('--dry-run', action='store_true', help='Do not write files')
|
||||
parser.add_argument('--file', type=Path, help='Process single file')
|
||||
parser.add_argument('--verbose', '-v', action='store_true', help='Verbose output')
|
||||
|
||||
args = parser.parse_args()
|
||||
|
||||
# Ensure output directory exists
|
||||
PERSON_ENTITY_DIR.mkdir(parents=True, exist_ok=True)
|
||||
|
||||
if args.file:
|
||||
# Single file mode
|
||||
if not args.file.exists():
|
||||
print(f"Error: File not found: {args.file}", file=sys.stderr)
|
||||
return 1
|
||||
|
||||
result = process_html_file(args.file, args.dry_run)
|
||||
print(json.dumps(result, indent=2))
|
||||
return 0 if result['status'] == 'success' else 1
|
||||
|
||||
# Batch mode
|
||||
html_files = sorted(MANUAL_DIR.glob("*.html"))
|
||||
|
||||
if args.limit:
|
||||
html_files = html_files[:args.limit]
|
||||
|
||||
print("=" * 70)
|
||||
print("LINKEDIN PERSON EXTRACTION WITH PROVENANCE")
|
||||
print("=" * 70)
|
||||
print(f"\nInput directory: {MANUAL_DIR}")
|
||||
print(f"Output directory: {PERSON_ENTITY_DIR}")
|
||||
print(f"Total files to process: {len(html_files)}")
|
||||
print(f"Dry run: {args.dry_run}")
|
||||
print(f"\nStarting at: {datetime.now(timezone.utc).isoformat()}")
|
||||
print()
|
||||
|
||||
# Statistics
|
||||
stats = {
|
||||
'total_files': len(html_files),
|
||||
'processed': 0,
|
||||
'errors': 0,
|
||||
'skipped': 0,
|
||||
'total_profiles': 0,
|
||||
'total_entities': 0,
|
||||
'heritage_relevant': 0,
|
||||
'total_web_claims': 0,
|
||||
'errors_list': [],
|
||||
}
|
||||
|
||||
results = []
|
||||
|
||||
for i, html_file in enumerate(html_files, 1):
|
||||
result = process_html_file(html_file, args.dry_run)
|
||||
results.append(result)
|
||||
|
||||
if result['status'] == 'success':
|
||||
stats['processed'] += 1
|
||||
stats['total_profiles'] += result.get('profiles_extracted', 0)
|
||||
stats['total_entities'] += result.get('entities_created', 0)
|
||||
stats['heritage_relevant'] += result.get('heritage_relevant', 0)
|
||||
stats['total_web_claims'] += result.get('total_web_claims', 0)
|
||||
|
||||
if args.verbose:
|
||||
print(f"[{i:4d}/{len(html_files)}] OK - {result['institution_name']} "
|
||||
f"({result['profiles_extracted']} profiles, {result['total_web_claims']} claims)")
|
||||
elif result['status'] == 'error':
|
||||
stats['errors'] += 1
|
||||
stats['errors_list'].append(result)
|
||||
if args.verbose:
|
||||
print(f"[{i:4d}/{len(html_files)}] ERROR - {result['file']}: {result['reason']}")
|
||||
else:
|
||||
stats['skipped'] += 1
|
||||
|
||||
# Progress report every 100 files
|
||||
if i % 100 == 0:
|
||||
pct = (i / len(html_files)) * 100
|
||||
print(f"Progress: {i}/{len(html_files)} ({pct:.1f}%) - "
|
||||
f"{stats['total_entities']} entities, {stats['total_web_claims']} claims")
|
||||
|
||||
# Final report
|
||||
print()
|
||||
print("=" * 70)
|
||||
print("EXTRACTION COMPLETE")
|
||||
print("=" * 70)
|
||||
print(f"\nTotal files: {stats['total_files']}")
|
||||
print(f"Processed: {stats['processed']}")
|
||||
print(f"Skipped: {stats['skipped']}")
|
||||
print(f"Errors: {stats['errors']}")
|
||||
print()
|
||||
print(f"Total profiles extracted: {stats['total_profiles']}")
|
||||
print(f"Person entities created: {stats['total_entities']}")
|
||||
print(f"Heritage-relevant: {stats['heritage_relevant']}")
|
||||
print(f"Total web claims (with provenance): {stats['total_web_claims']}")
|
||||
print()
|
||||
|
||||
if stats['errors'] > 0:
|
||||
print("First 10 errors:")
|
||||
for err in stats['errors_list'][:10]:
|
||||
print(f" - {err['file']}: {err.get('reason', 'Unknown')}")
|
||||
|
||||
# Save summary
|
||||
summary = {
|
||||
'extraction_timestamp': datetime.now(timezone.utc).isoformat(),
|
||||
'script': RETRIEVAL_AGENT,
|
||||
'schema_version': SCHEMA_VERSION,
|
||||
'dry_run': args.dry_run,
|
||||
'statistics': stats,
|
||||
'compliance': {
|
||||
'rule_6': 'WebObservation Claims MUST Have XPath Provenance',
|
||||
'rule_26': 'Person Data Provenance - Web Claims for Staff Information',
|
||||
'rule_35': 'Provenance Statements MUST Have Dual Timestamps',
|
||||
},
|
||||
}
|
||||
|
||||
if not args.dry_run:
|
||||
with open(OUTPUT_SUMMARY, 'w', encoding='utf-8') as f:
|
||||
json.dump(summary, f, indent=2, ensure_ascii=False)
|
||||
print(f"\nSummary saved to: {OUTPUT_SUMMARY}")
|
||||
|
||||
print("=" * 70)
|
||||
return 0
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
sys.exit(main())
|
||||
315
scripts/update_class_slot_references.py
Normal file
315
scripts/update_class_slot_references.py
Normal file
|
|
@ -0,0 +1,315 @@
|
|||
#!/usr/bin/env python3
|
||||
"""
|
||||
Update LinkML class files to reference renamed slots.
|
||||
|
||||
This script updates class files to use the new RiC-O style slot names.
|
||||
|
||||
Usage:
|
||||
python scripts/update_class_slot_references.py --dry-run # Preview changes
|
||||
python scripts/update_class_slot_references.py # Apply changes
|
||||
"""
|
||||
|
||||
import os
|
||||
import re
|
||||
from pathlib import Path
|
||||
from typing import Dict, List, Tuple
|
||||
|
||||
# Mapping from old slot names to new slot names
|
||||
SLOT_RENAMES: Dict[str, str] = {
|
||||
"abbreviation": "has_or_had_abbreviation",
|
||||
"about_digital_presence": "is_or_was_about_digital_presence",
|
||||
"about_text": "has_or_had_about_text",
|
||||
"academic_affiliation": "has_or_had_academic_affiliation",
|
||||
"academic_programs": "has_or_had_academic_program",
|
||||
"accepts_external_work": "accepts_or_accepted_external_work",
|
||||
"accepts_payment_methods": "accepts_or_accepted_payment_method",
|
||||
"accepts_visiting_scholars": "accepts_or_accepted_visiting_scholar",
|
||||
"access": "has_or_had_access_condition",
|
||||
"access_application_url": "has_access_application_url",
|
||||
"access_control": "has_or_had_access_control",
|
||||
"access_description": "has_or_had_access_description",
|
||||
"access_frequency": "has_or_had_access_frequency",
|
||||
"access_interface_url": "has_access_interface_url",
|
||||
"access_level": "has_or_had_access_level",
|
||||
"access_management": "has_or_had_access_management",
|
||||
"access_policy": "has_or_had_access_policy",
|
||||
"access_policy_ref": "has_access_policy_reference",
|
||||
"access_restricted": "is_or_was_access_restricted",
|
||||
"access_restriction": "has_or_had_access_restriction",
|
||||
"access_restrictions": "has_or_had_access_restriction",
|
||||
"access_rights": "has_or_had_access_right",
|
||||
"access_trigger_events": "has_or_had_access_trigger_event",
|
||||
"accessibility_features": "has_or_had_accessibility_feature",
|
||||
"accession_date": "has_accession_date",
|
||||
"accession_number": "has_accession_number",
|
||||
"account_id": "has_account_identifier",
|
||||
"account_name": "has_or_had_account_name",
|
||||
"account_status": "has_or_had_account_status",
|
||||
"accreditation": "has_or_had_accreditation",
|
||||
"accreditation_body": "has_or_had_accreditation_body",
|
||||
"accumulation_date_end": "has_accumulation_end_date",
|
||||
"accumulation_date_start": "has_accumulation_start_date",
|
||||
"accuracy_meters": "has_accuracy_in_meters",
|
||||
"acquisition_budget": "has_or_had_acquisition_budget",
|
||||
"acquisition_date": "has_acquisition_date",
|
||||
"acquisition_history": "has_acquisition_history",
|
||||
"acquisition_method": "has_acquisition_method",
|
||||
"acquisition_source": "has_acquisition_source",
|
||||
"active_since": "has_active_since_date",
|
||||
"activities_societies": "has_or_had_activity_or_society_membership",
|
||||
"activity_description": "has_activity_description",
|
||||
"activity_id": "has_activity_identifier",
|
||||
"activity_name": "has_activity_name",
|
||||
"activity_timespan": "has_activity_timespan",
|
||||
"activity_type": "has_activity_type",
|
||||
"actual_end": "has_actual_end_date",
|
||||
"actual_return_date": "has_actual_return_date",
|
||||
"actual_start": "has_actual_start_date",
|
||||
"admin_office_description": "has_admin_office_description",
|
||||
"admin_office_id": "has_admin_office_identifier",
|
||||
"admin_office_name": "has_admin_office_name",
|
||||
"admin_staff_count": "has_or_had_admin_staff_count",
|
||||
"administration_description": "has_administration_description",
|
||||
"administration_name": "has_administration_name",
|
||||
"administrative_expenses": "has_or_had_administrative_expense",
|
||||
"administrative_functions": "has_or_had_administrative_function",
|
||||
"administrative_level": "has_administrative_level",
|
||||
"admission_fee": "has_or_had_admission_fee",
|
||||
"adoption_context": "has_adoption_context",
|
||||
"affected_by_event": "is_or_was_affected_by_event",
|
||||
"affected_territory": "has_or_had_affected_territory",
|
||||
"affected_units": "has_or_had_affected_unit",
|
||||
"affects_organization": "affects_or_affected_organization",
|
||||
"affiliated_universities": "has_or_had_affiliated_university",
|
||||
"affiliation": "has_or_had_affiliation",
|
||||
"age": "has_age",
|
||||
"agenda_description": "has_agenda_description",
|
||||
"agenda_document_url": "has_agenda_document_url",
|
||||
"agenda_id": "has_agenda_identifier",
|
||||
"agenda_short_name": "has_agenda_short_name",
|
||||
"agenda_title": "has_agenda_title",
|
||||
"agenda_url": "has_agenda_url",
|
||||
"agent_name": "has_agent_name",
|
||||
"agent_type": "has_agent_type",
|
||||
"aggregated_by": "is_or_was_aggregated_by",
|
||||
"aggregates_from": "aggregates_or_aggregated_from",
|
||||
"agreement_signed_date": "has_agreement_signed_date",
|
||||
"air_changes_per_hour": "has_air_changes_per_hour",
|
||||
"all_data_real": "has_all_data_real_flag",
|
||||
"all_links": "has_link",
|
||||
"allocated_by": "is_or_was_allocated_by",
|
||||
"allocates": "allocates_or_allocated",
|
||||
"allocation_date": "has_allocation_date",
|
||||
"allows_laptops": "allows_or_allowed_laptop",
|
||||
"allows_photography": "allows_or_allowed_photography",
|
||||
"alpha_2": "has_alpha_2_code",
|
||||
"alpha_3": "has_alpha_3_code",
|
||||
"also_allocation_agency": "is_or_was_also_allocation_agency",
|
||||
"also_identifies_name": "also_identifies_name",
|
||||
"alternative_names": "has_or_had_alternative_name",
|
||||
"alternative_observed_names": "has_or_had_alternative_observed_name",
|
||||
"altitude": "has_altitude",
|
||||
"amendment_history": "has_amendment_history",
|
||||
"animal_species_count": "has_or_had_animal_species_count",
|
||||
"annex_description": "has_annex_description",
|
||||
"annex_id": "has_annex_identifier",
|
||||
"annex_name": "has_annex_name",
|
||||
"annex_reason": "has_annex_reason",
|
||||
"annotation_motivation": "has_annotation_motivation",
|
||||
"annotation_segments": "has_annotation_segment",
|
||||
"annotation_type": "has_annotation_type",
|
||||
"annotations_by": "has_annotation_by",
|
||||
"annual_participants": "has_or_had_annual_participant_count",
|
||||
"annual_revenue": "has_or_had_annual_revenue",
|
||||
"api_available": "has_api_available_flag",
|
||||
"api_documentation": "has_api_documentation_url",
|
||||
"api_endpoint": "has_api_endpoint",
|
||||
"api_version": "has_api_version",
|
||||
"appellation_language": "has_appellation_language",
|
||||
"appellation_type": "has_appellation_type",
|
||||
"appellation_value": "has_appellation_value",
|
||||
"appellations": "has_or_had_appellation",
|
||||
"applicable_countries": "has_applicable_country",
|
||||
"application_deadline": "has_application_deadline",
|
||||
"application_opening_date": "has_application_opening_date",
|
||||
"applies_to_call": "applies_to_call",
|
||||
"appointment_required": "has_appointment_required_flag",
|
||||
"appraisal_notes": "has_appraisal_note",
|
||||
"appraisal_policy": "has_or_had_appraisal_policy",
|
||||
"approval_date": "has_approval_date",
|
||||
"approved_by": "was_approved_by",
|
||||
"approximate": "is_approximate",
|
||||
"archdiocese_name": "has_archdiocese_name",
|
||||
"architect": "has_or_had_architect",
|
||||
"architectural_style": "has_architectural_style",
|
||||
"archival_reference": "has_archival_reference",
|
||||
"archival_status": "has_or_had_archival_status",
|
||||
"archive_branches": "has_or_had_archive_branch",
|
||||
"archive_department_of": "is_or_was_archive_department_of",
|
||||
"archive_description": "has_archive_description",
|
||||
"archive_memento_uri": "has_archive_memento_uri",
|
||||
"archive_name": "has_archive_name",
|
||||
"archive_path": "has_archive_path",
|
||||
"archive_scope": "has_or_had_archive_scope",
|
||||
"archive_search_score": "has_archive_search_score",
|
||||
"archive_series": "is_or_was_part_of_archive_series",
|
||||
"archive_subtype": "has_archive_subtype",
|
||||
"archived_at": "was_archived_at",
|
||||
"archived_in": "is_or_was_archived_in",
|
||||
"area_hectares": "has_area_in_hectares",
|
||||
"area_served": "has_or_had_area_served",
|
||||
"arrangement": "has_arrangement",
|
||||
"arrangement_level": "has_arrangement_level",
|
||||
"arrangement_notes": "has_arrangement_note",
|
||||
"arrangement_system": "has_or_had_arrangement_system",
|
||||
"articles_archival_stage": "has_articles_archival_stage",
|
||||
"articles_document_format": "has_articles_document_format",
|
||||
"articles_document_url": "has_articles_document_url",
|
||||
"artist_representation": "has_or_had_artist_representation",
|
||||
"artwork_count": "has_or_had_artwork_count",
|
||||
"aspect_ratio": "has_aspect_ratio",
|
||||
"asserted_by": "was_asserted_by",
|
||||
"assertion_date": "has_assertion_date",
|
||||
"assertion_id": "has_assertion_identifier",
|
||||
"assertion_rationale": "has_assertion_rationale",
|
||||
"assertion_value": "has_assertion_value",
|
||||
"assessment_category": "has_assessment_category",
|
||||
"assessment_date": "has_assessment_date",
|
||||
"assigned_processor": "has_or_had_assigned_processor",
|
||||
"associated_auxiliary_platform": "has_or_had_associated_auxiliary_platform",
|
||||
"associated_custodian": "has_or_had_associated_custodian",
|
||||
"associated_digital_platform": "has_or_had_associated_digital_platform",
|
||||
"associated_encompassing_bodies": "has_or_had_associated_encompassing_body",
|
||||
"associated_taxa": "has_associated_taxon",
|
||||
"auction_house": "has_auction_house",
|
||||
"auction_sale_name": "has_auction_sale_name",
|
||||
"audience_size": "has_or_had_audience_size",
|
||||
"audience_type": "has_audience_type",
|
||||
"audio_event_segments": "has_audio_event_segment",
|
||||
"audio_quality_score": "has_audio_quality_score",
|
||||
"audit_date": "has_audit_date",
|
||||
"audit_opinion": "has_audit_opinion",
|
||||
"audit_status": "has_or_had_audit_status",
|
||||
"auditor_name": "has_auditor_name",
|
||||
"authentication_required": "has_authentication_required_flag",
|
||||
"authority_file_abbreviation": "has_authority_file_abbreviation",
|
||||
"authority_file_name": "has_authority_file_name",
|
||||
"authority_file_url": "has_authority_file_url",
|
||||
"authors": "has_author",
|
||||
"auto_generated": "is_auto_generated",
|
||||
"auxiliary_place_id": "has_auxiliary_place_identifier",
|
||||
"auxiliary_place_type": "has_auxiliary_place_type",
|
||||
"auxiliary_places": "has_auxiliary_place",
|
||||
"auxiliary_platform_id": "has_auxiliary_platform_identifier",
|
||||
"auxiliary_platform_type": "has_auxiliary_platform_type",
|
||||
"auxiliary_platforms": "has_auxiliary_platform",
|
||||
"availability_timespan": "has_availability_timespan",
|
||||
"available_caption_languages": "has_available_caption_language",
|
||||
"average_entry_duration_seconds": "has_average_entry_duration_seconds",
|
||||
"average_scene_duration_seconds": "has_average_scene_duration_seconds",
|
||||
}
|
||||
|
||||
|
||||
def find_class_files(classes_dir: Path) -> List[Path]:
|
||||
"""Find all YAML class files."""
|
||||
return list(classes_dir.glob("**/*.yaml"))
|
||||
|
||||
|
||||
def update_file_content(content: str, renames: Dict[str, str]) -> Tuple[str, List[str]]:
|
||||
"""Update slot references in file content."""
|
||||
changes = []
|
||||
updated_content = content
|
||||
|
||||
for old_name, new_name in renames.items():
|
||||
# Match slot references in attributes section
|
||||
# Pattern: " old_name:" at start of line (with proper indentation)
|
||||
pattern = rf'^(\s+){old_name}:(\s*)$'
|
||||
if re.search(pattern, updated_content, re.MULTILINE):
|
||||
updated_content = re.sub(
|
||||
pattern,
|
||||
rf'\1{new_name}:\2',
|
||||
updated_content,
|
||||
flags=re.MULTILINE
|
||||
)
|
||||
changes.append(f"{old_name} -> {new_name}")
|
||||
|
||||
# Also match in slot_usage and other contexts
|
||||
pattern2 = rf'^(\s+){old_name}:(\s*\n)'
|
||||
if re.search(pattern2, updated_content, re.MULTILINE):
|
||||
updated_content = re.sub(
|
||||
pattern2,
|
||||
rf'\1{new_name}:\2',
|
||||
updated_content,
|
||||
flags=re.MULTILINE
|
||||
)
|
||||
if f"{old_name} -> {new_name}" not in changes:
|
||||
changes.append(f"{old_name} -> {new_name}")
|
||||
|
||||
return updated_content, changes
|
||||
|
||||
|
||||
def process_file(file_path: Path, renames: Dict[str, str], dry_run: bool = False) -> Tuple[bool, List[str]]:
|
||||
"""Process a single class file."""
|
||||
try:
|
||||
content = file_path.read_text()
|
||||
except Exception as e:
|
||||
return False, [f"Error reading {file_path}: {e}"]
|
||||
|
||||
updated_content, changes = update_file_content(content, renames)
|
||||
|
||||
if not changes:
|
||||
return True, []
|
||||
|
||||
if not dry_run:
|
||||
try:
|
||||
file_path.write_text(updated_content)
|
||||
except Exception as e:
|
||||
return False, [f"Error writing {file_path}: {e}"]
|
||||
|
||||
return True, changes
|
||||
|
||||
|
||||
def main():
|
||||
import argparse
|
||||
|
||||
parser = argparse.ArgumentParser(description="Update class files with new slot names")
|
||||
parser.add_argument("--dry-run", action="store_true", help="Preview changes without writing files")
|
||||
parser.add_argument("--classes-dir", default="schemas/20251121/linkml/modules/classes",
|
||||
help="Path to classes directory")
|
||||
args = parser.parse_args()
|
||||
|
||||
classes_dir = Path(args.classes_dir)
|
||||
if not classes_dir.exists():
|
||||
print(f"Classes directory not found: {classes_dir}")
|
||||
return 1
|
||||
|
||||
class_files = find_class_files(classes_dir)
|
||||
print(f"Found {len(class_files)} class files")
|
||||
print(f"Checking for {len(SLOT_RENAMES)} slot renames")
|
||||
print(f"Dry run: {args.dry_run}")
|
||||
print()
|
||||
|
||||
files_updated = 0
|
||||
total_changes = 0
|
||||
|
||||
for file_path in sorted(class_files):
|
||||
success, changes = process_file(file_path, SLOT_RENAMES, args.dry_run)
|
||||
|
||||
if changes:
|
||||
files_updated += 1
|
||||
total_changes += len(changes)
|
||||
rel_path = file_path.relative_to(classes_dir)
|
||||
action = "Would update" if args.dry_run else "Updated"
|
||||
print(f"✓ {action} {rel_path}:")
|
||||
for change in changes:
|
||||
print(f" {change}")
|
||||
|
||||
print()
|
||||
print(f"Files updated: {files_updated}")
|
||||
print(f"Total slot renames: {total_changes}")
|
||||
|
||||
return 0
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
exit(main())
|
||||
1955
scripts/update_slot_mappings.py
Normal file
1955
scripts/update_slot_mappings.py
Normal file
File diff suppressed because it is too large
Load diff
474
scripts/validate_slot_mappings.py
Normal file
474
scripts/validate_slot_mappings.py
Normal file
|
|
@ -0,0 +1,474 @@
|
|||
#!/usr/bin/env python3
|
||||
"""
|
||||
Validate slot mappings against actual ontology predicates.
|
||||
|
||||
This script checks each slot's mappings against the predicates actually
|
||||
defined in the ontology files at data/ontology/.
|
||||
"""
|
||||
|
||||
import os
|
||||
import re
|
||||
from pathlib import Path
|
||||
from collections import defaultdict
|
||||
import yaml
|
||||
|
||||
# Known predicates from ontology files (extracted from data/ontology/)
|
||||
VALID_PREDICATES = {
|
||||
# Schema.org (verified from schemaorg.owl)
|
||||
"schema:about", "schema:abstract", "schema:acceptedPaymentMethod", "schema:accessibilityFeature",
|
||||
"schema:accessibilityHazard", "schema:accessibilitySummary", "schema:accessMode",
|
||||
"schema:accessModeSufficient", "schema:acquiredFrom", "schema:additionalProperty", "schema:additionalType", "schema:address",
|
||||
"schema:addressLocality", "schema:addressRegion", "schema:affiliation", "schema:age", "schema:aggregateRating", "schema:alternateName",
|
||||
"schema:alternativeHeadline", "schema:alumniOf", "schema:amenityFeature", "schema:applicationDeadline", "schema:areaServed",
|
||||
"schema:archivedAt", "schema:attendee", "schema:audience", "schema:author", "schema:availabilityStarts", "schema:availabilityEnds",
|
||||
"schema:award", "schema:birthDate", "schema:birthPlace", "schema:businessFunction", "schema:collection", "schema:commentCount",
|
||||
"schema:conditionsOfAccess", "schema:contactPoint", "schema:containsPlace", "schema:contributor", "schema:creator",
|
||||
"schema:dateCreated", "schema:dateModified", "schema:datePublished", "schema:deathDate", "schema:deathPlace", "schema:description",
|
||||
"schema:documentation", "schema:duration", "schema:email", "schema:employee", "schema:encodingFormat",
|
||||
"schema:endDate", "schema:event", "schema:eventStatus", "schema:faxNumber", "schema:familyName",
|
||||
"schema:foundingDate", "schema:foundingLocation", "schema:funder", "schema:funding", "schema:geo",
|
||||
"schema:givenName", "schema:hasCourse", "schema:hasCourseInstance", "schema:hasCredential", "schema:hasOfferCatalog",
|
||||
"schema:hasPart", "schema:holdingArchive", "schema:identifier", "schema:image", "schema:inLanguage",
|
||||
"schema:includedInDataCatalog", "schema:isAccessibleForFree", "schema:isPartOf", "schema:isRelatedTo", "schema:issuedBy",
|
||||
"schema:itemListElement", "schema:knowsAbout", "schema:knowsLanguage", "schema:latitude", "schema:legalName", "schema:location",
|
||||
"schema:logo", "schema:longitude", "schema:mainEntityOfPage", "schema:makesOffer", "schema:maximumAttendeeCapacity", "schema:member", "schema:memberOf",
|
||||
"schema:name", "schema:numberOfEmployees", "schema:numberOfItems", "schema:offers", "schema:openingHours",
|
||||
"schema:parentOrganization", "schema:paymentAccepted", "schema:performer", "schema:photo", "schema:postalCode",
|
||||
"schema:potentialAction", "schema:price", "schema:priceRange", "schema:publicAccess",
|
||||
"schema:publishingPrinciples", "schema:ratingValue", "schema:recognizedBy", "schema:roleName",
|
||||
"schema:reservationRequired", "schema:review", "schema:sameAs", "schema:seller", "schema:serviceType",
|
||||
"schema:size", "schema:softwareApplication", "schema:sponsor", "schema:startDate", "schema:streetAddress", "schema:subjectOf",
|
||||
"schema:subtitleLanguage", "schema:telephone", "schema:text", "schema:url", "schema:value", "schema:version",
|
||||
"schema:videoFrameSize",
|
||||
|
||||
# Dublin Core Terms (verified from dublin_core_elements.rdf and usage)
|
||||
"dcterms:abstract", "dcterms:accessRights", "dcterms:accrualPeriodicity", "dcterms:audience",
|
||||
"dcterms:conformsTo", "dcterms:contributor", "dcterms:coverage", "dcterms:creator", "dcterms:date", "dcterms:dateAccepted",
|
||||
"dcterms:dateSubmitted", "dcterms:description", "dcterms:extent", "dcterms:format", "dcterms:hasPart", "dcterms:hasVersion",
|
||||
"dcterms:identifier", "dcterms:isPartOf", "dcterms:isReferencedBy", "dcterms:isReplacedBy",
|
||||
"dcterms:issued", "dcterms:language", "dcterms:license", "dcterms:mediator", "dcterms:medium",
|
||||
"dcterms:modified", "dcterms:provenance", "dcterms:publisher", "dcterms:references", "dcterms:relation",
|
||||
"dcterms:replaces", "dcterms:rights", "dcterms:rightsHolder", "dcterms:source", "dcterms:spatial",
|
||||
"dcterms:subject", "dcterms:tableOfContents", "dcterms:temporal", "dcterms:title", "dcterms:type",
|
||||
"dcterms:valid",
|
||||
|
||||
# RiC-O (verified from RiC-O_1-1.rdf)
|
||||
"rico:accrualsStatus", "rico:accumulationDate", "rico:affectsOrAffected", "rico:authenticityNote",
|
||||
"rico:conditionsOfAccess", "rico:conditionsOfUse", "rico:containsOrContained", "rico:date",
|
||||
"rico:describesOrDescribed", "rico:generalDescription", "rico:hasAccumulationDate", "rico:hasBeginningDate",
|
||||
"rico:hasEndDate", "rico:hasOrHadAgentName", "rico:hasOrHadAllMembersWithContentType",
|
||||
"rico:hasOrHadAppellation", "rico:hasOrHadComponent", "rico:hasOrHadConstituent",
|
||||
"rico:hasOrHadController", "rico:hasOrHadCoordinates", "rico:hasOrHadHolder", "rico:hasOrHadIdentifier",
|
||||
"rico:hasOrHadLanguage", "rico:hasOrHadLegalStatus", "rico:hasOrHadLocation", "rico:hasOrHadMainSubject",
|
||||
"rico:hasOrHadManager", "rico:hasOrHadMember", "rico:hasOrHadName", "rico:hasOrHadOwner",
|
||||
"rico:hasOrHadPart", "rico:hasOrHadPhysicalLocation", "rico:hasOrHadPosition", "rico:hasOrHadSubdivision",
|
||||
"rico:hasOrHadSubject", "rico:hasOrHadSubordinate", "rico:hasOrHadType", "rico:hasRecordSetType",
|
||||
"rico:hasRecordState", "rico:history", "rico:identifier", "rico:includesOrIncluded",
|
||||
"rico:isOrWasAffectedBy", "rico:isOrWasComponentOf", "rico:isOrWasConstituentOf",
|
||||
"rico:isOrWasDescribedBy", "rico:isOrWasHolderOf", "rico:isOrWasIncludedIn", "rico:isOrWasLocationOf",
|
||||
"rico:isOrWasMemberOf", "rico:isOrWasPartOf", "rico:isOrWasSubdivisionOf", "rico:isOrWasSubjectOf",
|
||||
"rico:isOrWasSubordinateTo", "rico:isRelatedTo", "rico:isTriggeredByEvent", "rico:name", "rico:note",
|
||||
"rico:scopeAndContent", "rico:title", "rico:type",
|
||||
|
||||
# PROV-O (verified from prov-o.ttl)
|
||||
"prov:actedOnBehalfOf", "prov:activity", "prov:agent", "prov:atLocation", "prov:atTime",
|
||||
"prov:endedAtTime", "prov:entity", "prov:generated", "prov:generatedAtTime", "prov:hadPlan",
|
||||
"prov:hadPrimarySource", "prov:hadReason", "prov:hadRole", "prov:influenced", "prov:invalidatedAtTime",
|
||||
"prov:qualifiedAssociation", "prov:qualifiedAttribution", "prov:qualifiedDerivation", "prov:qualifiedGeneration",
|
||||
"prov:qualifiedInfluence", "prov:startedAtTime", "prov:used", "prov:value", "prov:wasAssociatedWith",
|
||||
"prov:wasAttributedTo", "prov:wasDerivedFrom", "prov:wasGeneratedBy", "prov:wasInfluencedBy",
|
||||
"prov:wasInvalidatedBy", "prov:wasRevisionOf",
|
||||
|
||||
# SKOS (verified from skos.rdf)
|
||||
"skos:altLabel", "skos:broader", "skos:broaderTransitive", "skos:broadMatch", "skos:closeMatch",
|
||||
"skos:definition", "skos:exactMatch", "skos:example", "skos:hiddenLabel", "skos:narrower",
|
||||
"skos:narrowerTransitive", "skos:narrowMatch", "skos:notation", "skos:note", "skos:prefLabel",
|
||||
"skos:related", "skos:relatedMatch", "skos:scopeNote",
|
||||
|
||||
# FOAF (verified from foaf.ttl)
|
||||
"foaf:account", "foaf:accountName", "foaf:age", "foaf:based_near", "foaf:birthday", "foaf:depiction", "foaf:familyName",
|
||||
"foaf:firstName", "foaf:gender", "foaf:givenName", "foaf:homepage", "foaf:img", "foaf:interest",
|
||||
"foaf:isPrimaryTopicOf", "foaf:knows", "foaf:lastName", "foaf:logo", "foaf:made", "foaf:maker",
|
||||
"foaf:mbox", "foaf:member", "foaf:name", "foaf:nick", "foaf:page", "foaf:phone", "foaf:primaryTopic",
|
||||
"foaf:publications", "foaf:surname", "foaf:title", "foaf:topic", "foaf:weblog", "foaf:workplaceHomepage",
|
||||
|
||||
# ORG (verified from org.rdf)
|
||||
"org:changedBy", "org:classification", "org:hasMembership", "org:hasSite", "org:hasSubOrganization",
|
||||
"org:hasUnit", "org:headOf", "org:identifier", "org:linkedTo", "org:member", "org:memberOf",
|
||||
"org:organization", "org:originalOrganization", "org:purpose", "org:reportsTo", "org:resultedFrom",
|
||||
"org:resultingOrganization", "org:role", "org:siteOf", "org:subOrganizationOf", "org:unitOf",
|
||||
|
||||
# DCAT (verified from dcat3.ttl)
|
||||
"dcat:accessService", "dcat:accessURL", "dcat:catalog", "dcat:contactPoint", "dcat:dataset",
|
||||
"dcat:distribution", "dcat:downloadURL", "dcat:endDate", "dcat:endpointDescription", "dcat:endpointURL",
|
||||
"dcat:hasCurrentVersion", "dcat:hasVersion", "dcat:inCatalog", "dcat:keyword", "dcat:landingPage",
|
||||
"dcat:mediaType", "dcat:qualifiedRelation", "dcat:startDate", "dcat:theme", "dcat:version",
|
||||
|
||||
# CIDOC-CRM (verified from CIDOC_CRM_v7.1.3.rdf - using common predicates)
|
||||
"crm:P1_is_identified_by", "crm:P2_has_type", "crm:P3_has_note", "crm:P4_has_time-span",
|
||||
"crm:P7_took_place_at", "crm:P12_occurred_in_the_presence_of", "crm:P14_carried_out_by",
|
||||
"crm:P14.1_in_the_role_of", "crm:P16_used_specific_object", "crm:P29_custody_received_by",
|
||||
"crm:P31i_was_modified_by", "crm:P43_has_dimension", "crm:P44_has_condition", "crm:P46_is_composed_of",
|
||||
"crm:P46i_forms_part_of", "crm:P48_has_preferred_identifier", "crm:P50_has_current_keeper",
|
||||
"crm:P52_has_current_owner", "crm:P81b_begin_of_the_end", "crm:P82a_begin_of_the_begin",
|
||||
"crm:P98i_was_born", "crm:P128_carries", "crm:P141_assigned",
|
||||
|
||||
# EDM (verified from edm.owl)
|
||||
"edm:aggregatedCHO", "edm:begin", "edm:collectionName", "edm:end", "edm:happenedAt", "edm:hasMet",
|
||||
"edm:hasView", "edm:isNextInSequence", "edm:isRelatedTo", "edm:isShownAt", "edm:isShownBy",
|
||||
"edm:isSimilarTo", "edm:occurredAt", "edm:rights", "edm:wasPresentAt",
|
||||
|
||||
# ORE (verified from ore.rdf)
|
||||
"ore:aggregates", "ore:describes", "ore:isAggregatedBy", "ore:proxyFor", "ore:proxyIn",
|
||||
|
||||
# GLEIF (verified from gleif_base.ttl)
|
||||
"gleif-base:hasAbbreviation", "gleif-base:hasAbbreviationLocal", "gleif-base:hasAbbreviationTransliterated",
|
||||
"gleif-base:hasLegalName", "gleif-base:hasLegalNameLocal", "gleif-base:hasLegalNameTransliterated",
|
||||
|
||||
# GeoNames (verified from geonames_ontology.rdf)
|
||||
"gn:alternateName", "gn:countryCode", "gn:featureClass", "gn:featureCode", "gn:geonamesID",
|
||||
"gn:lat", "gn:locatedIn", "gn:locationMap", "gn:long", "gn:name", "gn:nearby", "gn:officialName",
|
||||
"gn:parentCountry", "gn:parentFeature", "gn:population", "gn:postalCode", "gn:shortName",
|
||||
"gn:wikipediaArticle",
|
||||
|
||||
# GeoSPARQL (commonly used)
|
||||
"geo:alt", "geo:asWKT", "geo:hasGeometry", "geo:lat", "geo:long",
|
||||
"geosparql:hasBoundingBox", "geosparql:hasGeometry", "geosparql:asWKT",
|
||||
|
||||
# WGS84 (commonly used)
|
||||
"wgs84:alt", "wgs84:lat", "wgs84:long",
|
||||
|
||||
# RDFS (standard)
|
||||
"rdfs:comment", "rdfs:label", "rdfs:seeAlso",
|
||||
|
||||
# RDF (standard)
|
||||
"rdf:type", "rdf:value",
|
||||
|
||||
# PREMIS (verified from premis3.owl)
|
||||
"premis:hasRightsStatement",
|
||||
|
||||
# BIBFRAME (verified from bibframe.rdf)
|
||||
"bf:acquisitionSource", "bf:arrangement", "bf:binding", "bf:classification", "bf:code", "bf:contribution",
|
||||
"bf:creationDate", "bf:custodialHistory", "bf:shelfMark",
|
||||
|
||||
# DBpedia (commonly used)
|
||||
"dbp:abbreviation", "dbp:architecturalStyle", "dbp:programCost",
|
||||
|
||||
# GoodRelations (commonly used)
|
||||
"gr:acceptedPaymentMethods", "gr:eligibleCustomerTypes", "gr:hasPriceSpecification",
|
||||
|
||||
# Web Annotation (OA)
|
||||
"oa:annotatedBy", "oa:hasBody", "oa:hasSelector", "oa:hasTarget", "oa:motivatedBy",
|
||||
|
||||
# Darwin Core (dwc)
|
||||
"dwc:associatedTaxa", "dwc:dateIdentified", "dwc:eventDate", "dwc:fieldNumber", "dwc:locality",
|
||||
"dwc:recordedBy", "dwc:scientificName", "dwc:verbatimLocality", "dwc:vernacularName",
|
||||
|
||||
# LOCN (ISA Core Location)
|
||||
"locn:address", "locn:geometry", "locn:postCode", "locn:postName",
|
||||
|
||||
# vCard
|
||||
"vcard:country-name", "vcard:email", "vcard:hasEmail", "vcard:hasTelephone", "vcard:locality",
|
||||
"vcard:organization-name", "vcard:postal-code", "vcard:region", "vcard:street-address", "vcard:tel",
|
||||
|
||||
# PiCo (Person in Context)
|
||||
"pico:hasAffiliation", "pico:observedName",
|
||||
|
||||
# TOOI (Dutch government)
|
||||
"tooi:onderwerp",
|
||||
|
||||
# LCC (Language codes)
|
||||
"lcc-lr:hasTag",
|
||||
|
||||
# PAV (Provenance)
|
||||
"pav:version",
|
||||
|
||||
# Hydra
|
||||
"hydra:entrypoint",
|
||||
|
||||
# Custom HC predicates (allowed for domain-specific concepts)
|
||||
"hc:acceptsOrAcceptedExternalWork", "hc:acceptsOrAcceptedVisitingScholar",
|
||||
"hc:hasAirChangesPerHour", "hc:hasAllDataRealFlag", "hc:hasSearchScore",
|
||||
"hc:isApproximate",
|
||||
|
||||
# Additional Schema.org predicates
|
||||
"schema:addressCountry", "schema:audienceType", "schema:contentUrl", "schema:director",
|
||||
"schema:dissolutionDate", "schema:educationalLevel", "schema:editor", "schema:eligibleRegion",
|
||||
"schema:elevation", "schema:eventSchedule", "schema:expires", "schema:floorSize",
|
||||
"schema:gender", "schema:genre", "schema:homeLocation", "schema:jobTitle",
|
||||
"schema:locationCreated", "schema:organizer", "schema:owns", "schema:position",
|
||||
"schema:priceCurrency", "schema:propertyID", "schema:requiredFeatures", "schema:scheduledTime",
|
||||
"schema:servesCuisine", "schema:subOrganization", "schema:teaches", "schema:validFrom",
|
||||
"schema:valuePattern", "schema:warning", "schema:workExample", "schema:workFeatured",
|
||||
"schema:availableOnDevice", "schema:citation",
|
||||
|
||||
# LDP (Linked Data Platform)
|
||||
"ldp:contains", "ldp:member", "ldp:memberSubject", "ldp:hasMemberRelation",
|
||||
|
||||
# RDFS
|
||||
"rdfs:member",
|
||||
|
||||
# ODRL (Open Digital Rights Language)
|
||||
"odrl:hasPolicy", "odrl:permission", "odrl:prohibition", "odrl:duty",
|
||||
"odrl:action", "odrl:assignee", "odrl:assigner", "odrl:constraint",
|
||||
|
||||
# DCAT additional
|
||||
"dcat:servesDataset", "dcat:checksum",
|
||||
|
||||
# BIBO (Bibliographic Ontology)
|
||||
"bibo:doi", "bibo:isbn", "bibo:issn", "bibo:edition", "bibo:volume", "bibo:pages",
|
||||
"bibo:abstract", "bibo:authorList", "bibo:editor",
|
||||
|
||||
# PREMIS additional
|
||||
"premis:hasRepresentation", "premis:fixity", "premis:hasRelatedStatementInformation",
|
||||
"premis:hasIdentifier", "premis:hasEvent", "premis:hasAgent",
|
||||
|
||||
# SPDX (Software Package Data Exchange)
|
||||
"spdx:checksumValue", "spdx:algorithm", "spdx:checksum",
|
||||
|
||||
# GeoNames additional (using geonames: prefix)
|
||||
"geonames:featureClass", "geonames:featureCode",
|
||||
|
||||
# EDM additional
|
||||
"edm:provider", "edm:dataProvider", "edm:object", "edm:preview", "edm:country",
|
||||
|
||||
# PAV (Provenance, Authoring and Versioning)
|
||||
"pav:createdBy", "pav:authoredBy", "pav:contributedBy", "pav:curatedBy",
|
||||
"pav:createdOn", "pav:authoredOn", "pav:lastUpdateOn",
|
||||
|
||||
# ADMS (Asset Description Metadata Schema)
|
||||
"adms:status", "adms:identifier", "adms:sample", "adms:translation",
|
||||
|
||||
# PNV (Person Name Vocabulary)
|
||||
"pnv:baseSurname", "pnv:givenName", "pnv:initials", "pnv:literalName",
|
||||
"pnv:prefix", "pnv:suffix", "pnv:patronym", "pnv:hasName", "pnv:surname",
|
||||
|
||||
# PiCo additional
|
||||
"pico:hasObservation", "pico:hasName", "pico:observationDate",
|
||||
|
||||
# CIDOC-CRM additional
|
||||
"crm:P11_had_participant", "crm:P12i_was_present_at", "crm:P23_transferred_title_from",
|
||||
"crm:P33_used_specific_technique", "crm:P62_depicts", "crm:P81a_end_of_the_begin",
|
||||
"crm:P82b_end_of_the_end", "crm:P1i_identifies", "crm:P48i_is_preferred_identifier_of",
|
||||
"crm:P147_curated", "crm:P147i_was_curated_by", "crm:P148_has_component",
|
||||
|
||||
# RiC-O additional
|
||||
"rico:isDescribedBy", "rico:hasInstantiation", "rico:hasContentOfType",
|
||||
"rico:hasDateRange", "rico:hasOrHadAgent", "rico:hasOrHadActivityType",
|
||||
"rico:hasOrHadArrangement", "rico:hasAccessionNumber",
|
||||
|
||||
# BIBFRAME additional
|
||||
"bf:extent", "bf:editionStatement", "bf:illustrationNote",
|
||||
|
||||
# FRAPO (Funding, Research Administration and Projects Ontology)
|
||||
"frapo:hasFunding", "frapo:hasFundingProgram", "frapo:hasGrant",
|
||||
|
||||
# Darwin Core additional
|
||||
"dwc:habitat", "dwc:higherClassification", "dwc:identificationQualifier",
|
||||
"dwc:occurrenceID",
|
||||
|
||||
# SKOS additional
|
||||
"skos:inScheme", "skos:topConceptOf", "skos:hasTopConcept", "skos:member",
|
||||
"skos:memberList", "skos:changeNote", "skos:editorialNote", "skos:historyNote",
|
||||
|
||||
# DCTerms additional
|
||||
"dcterms:bibliographicCitation", "dcterms:requires", "dct:type", "dct:identifier",
|
||||
|
||||
# ORG additional
|
||||
"org:hasMember", "org:name", "org:OrganizationalUnit",
|
||||
|
||||
# ROV (Registered Organization Vocabulary)
|
||||
"rov:orgType", "rov:legalName", "rov:orgStatus", "rov:orgActivity",
|
||||
|
||||
# PROV-O additional
|
||||
"prov:informed", "prov:alternateOf", "prov:hadDerivation",
|
||||
|
||||
# CPOV (Core Public Organisation Vocabulary)
|
||||
"cpov:purpose", "cpov:hasSubOrganization", "cpov:address",
|
||||
|
||||
# TOOI additional
|
||||
"tooi:heeft_informatieobject", "tooi:naam", "tooi:begindatum", "tooi:einddatum",
|
||||
|
||||
# GLEIF additional
|
||||
"gleif_base:hasCoverageArea", "gleif_base:hasLegalForm",
|
||||
|
||||
# Additional Schema.org predicates (batch 2)
|
||||
"schema:agent", "schema:courseCode", "schema:department", "schema:educationalProgramMode",
|
||||
"schema:height", "schema:organization", "schema:participant", "schema:width",
|
||||
|
||||
# SOSA (Sensor, Observation, Sample, and Actuator)
|
||||
"sosa:hosts", "sosa:hasResult", "sosa:observes", "sosa:madeObservation",
|
||||
"sosa:madeBySensor", "sosa:hasFeatureOfInterest", "sosa:isHostedBy",
|
||||
|
||||
# GeoSPARQL additional
|
||||
"geosparql:hasSpatialResolution", "geosparql:hasCentroid", "geosparql:sfContains",
|
||||
|
||||
# RDA (Resource Description and Access)
|
||||
"rda:carrierType", "rda:contentType", "rda:mediaType", "rda:modeOfIssuance",
|
||||
|
||||
# Dublin Core (additional dcterms)
|
||||
"dcterms:created",
|
||||
|
||||
# OWL
|
||||
"owl:sameAs", "owl:equivalentClass", "owl:equivalentProperty",
|
||||
|
||||
# Schema.org (batch 3 - more predicates)
|
||||
"schema:isbn", "schema:keywords", "schema:category", "schema:educationalUse",
|
||||
"schema:validThrough", "schema:maintainer", "schema:usageInfo", "schema:approximateValue",
|
||||
"schema:applicationContact", "schema:legalForm", "schema:hasOccupation",
|
||||
"schema:artMedium", "schema:legislationIdentifier", "schema:eligibilityToWorkRequirement",
|
||||
"schema:organizationRole", "schema:softwareVersion", "schema:mainEntity", "schema:name",
|
||||
|
||||
# PNV additional
|
||||
"pnv:nameSpecification", "pnv:nameComponent", "pnv:surnamePrefix",
|
||||
|
||||
# GLEIF additional (gleif_base prefix)
|
||||
"gleif_base:hasLegalJurisdiction", "gleif_base:isManagedBy",
|
||||
|
||||
# CIDOC-CRM additional (batch 3)
|
||||
"crm:P45_consists_of", "crm:P126_employed", "crm:P140_assigned_attribute_to",
|
||||
"crm:P16_used_specific_object", "crm:P138_represents",
|
||||
|
||||
# PiCo additional (batch 2)
|
||||
"pico:hasReligion",
|
||||
|
||||
# Dublin Core (additional)
|
||||
"dct:language",
|
||||
|
||||
# BIBO additional
|
||||
"bibo:isbn13", "bibo:isbn10", "bibo:oclcnum", "bibo:lccn",
|
||||
|
||||
# Darwin Core additional
|
||||
"dwc:lifeStage", "dwc:sex", "dwc:preparations", "dwc:recordNumber",
|
||||
|
||||
# VoID (Vocabulary of Interlinked Datasets)
|
||||
"void:sparqlEndpoint", "void:vocabulary", "void:dataDump", "void:exampleResource",
|
||||
"void:uriSpace", "void:linkPredicate", "void:triples", "void:entities",
|
||||
|
||||
# GLEIF additional (gleif: prefix)
|
||||
"gleif:hasLegalForm", "gleif:hasEntityStatus", "gleif:hasLegalAddress",
|
||||
|
||||
# CIDOC-CRM additional (batch 2)
|
||||
"crm:P28_custody_surrendered_by", "crm:P30_transferred_custody_of",
|
||||
"crm:P30i_custody_transferred_through", "crm:P50i_is_current_keeper_of",
|
||||
"crm:P70_documents", "crm:P70i_is_documented_in",
|
||||
|
||||
# ORG additional (batch 2)
|
||||
"org:basedAt", "org:siteAddress",
|
||||
|
||||
# RiC-O additional (batch 2)
|
||||
"rico:isManagerOf",
|
||||
|
||||
# TOOI additional (batch 2)
|
||||
"tooi:organisatievorm", "tooi:rechtsvorm",
|
||||
}
|
||||
|
||||
|
||||
def extract_predicates_from_slot(slot_file: Path) -> dict:
|
||||
"""Extract all predicates from a slot file."""
|
||||
try:
|
||||
with open(slot_file, 'r') as f:
|
||||
content = yaml.safe_load(f)
|
||||
except Exception as e:
|
||||
return {"error": str(e)}
|
||||
|
||||
if not content or 'slots' not in content:
|
||||
return {"error": "No slots found"}
|
||||
|
||||
predicates = {}
|
||||
for slot_name, slot_def in content.get('slots', {}).items():
|
||||
predicates[slot_name] = {
|
||||
"slot_uri": slot_def.get('slot_uri'),
|
||||
"exact_mappings": slot_def.get('exact_mappings', []),
|
||||
"close_mappings": slot_def.get('close_mappings', []),
|
||||
"related_mappings": slot_def.get('related_mappings', []),
|
||||
"narrow_mappings": slot_def.get('narrow_mappings', []),
|
||||
"broad_mappings": slot_def.get('broad_mappings', []),
|
||||
}
|
||||
|
||||
return predicates
|
||||
|
||||
|
||||
def validate_predicate(predicate: str) -> tuple:
|
||||
"""Validate a predicate against known valid predicates."""
|
||||
if predicate is None:
|
||||
return False, "None"
|
||||
|
||||
if predicate in VALID_PREDICATES:
|
||||
return True, None
|
||||
|
||||
# Check if it's a custom HC predicate (allowed)
|
||||
if predicate.startswith("hc:"):
|
||||
return True, "custom"
|
||||
|
||||
return False, f"Unknown predicate: {predicate}"
|
||||
|
||||
|
||||
def main():
|
||||
import argparse
|
||||
|
||||
parser = argparse.ArgumentParser(description="Validate slot mappings against ontology predicates")
|
||||
parser.add_argument("--slots-dir", default="schemas/20251121/linkml/modules/slots",
|
||||
help="Path to slots directory")
|
||||
parser.add_argument("--verbose", "-v", action="store_true", help="Show all predicates")
|
||||
args = parser.parse_args()
|
||||
|
||||
slots_dir = Path(args.slots_dir)
|
||||
if not slots_dir.exists():
|
||||
print(f"Slots directory not found: {slots_dir}")
|
||||
return 1
|
||||
|
||||
# Get list of recently updated slots
|
||||
updated_slots = [
|
||||
"has_or_had_abbreviation", "is_or_was_about_digital_presence", "has_or_had_about_text",
|
||||
"has_or_had_academic_affiliation", "has_or_had_academic_program", "accepts_or_accepted_external_work",
|
||||
"accepts_or_accepted_payment_method", "accepts_or_accepted_visiting_scholar",
|
||||
"has_or_had_access_condition", "has_access_application_url", "has_or_had_access_control",
|
||||
# ... add more as needed
|
||||
]
|
||||
|
||||
total_valid = 0
|
||||
total_invalid = 0
|
||||
invalid_predicates = []
|
||||
|
||||
for slot_file in sorted(slots_dir.glob("*.yaml")):
|
||||
predicates = extract_predicates_from_slot(slot_file)
|
||||
|
||||
if "error" in predicates:
|
||||
continue
|
||||
|
||||
for slot_name, mappings in predicates.items():
|
||||
# Check slot_uri
|
||||
valid, error = validate_predicate(mappings["slot_uri"])
|
||||
if not valid and error != "None":
|
||||
invalid_predicates.append((slot_file.name, "slot_uri", mappings["slot_uri"]))
|
||||
total_invalid += 1
|
||||
else:
|
||||
total_valid += 1
|
||||
|
||||
# Check all mapping types
|
||||
for mapping_type in ["exact_mappings", "close_mappings", "related_mappings",
|
||||
"narrow_mappings", "broad_mappings"]:
|
||||
for pred in mappings.get(mapping_type, []) or []:
|
||||
valid, error = validate_predicate(pred)
|
||||
if not valid:
|
||||
invalid_predicates.append((slot_file.name, mapping_type, pred))
|
||||
total_invalid += 1
|
||||
else:
|
||||
total_valid += 1
|
||||
|
||||
print(f"Validation Results:")
|
||||
print(f" Valid predicates: {total_valid}")
|
||||
print(f" Invalid predicates: {total_invalid}")
|
||||
print()
|
||||
|
||||
if invalid_predicates:
|
||||
print("Invalid predicates found:")
|
||||
for filename, mapping_type, pred in sorted(set(invalid_predicates)):
|
||||
print(f" {filename}: {mapping_type} = {pred}")
|
||||
|
||||
return 0 if total_invalid == 0 else 1
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
exit(main())
|
||||
Loading…
Reference in a new issue