Commit graph

71 commits

Author SHA1 Message Date
kempersc
66ab2908d0 fix: remove deprecated AnnotationMotivationEnum, add European surname data
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Deploy Frontend / build-and-deploy (push) Failing after 3m21s
- Move deprecated AnnotationMotivationEnum to archive-deprecated/ (outside served paths)
- Add French, Italian, Polish, Spanish surname datasets for entity resolution
- Update name_commonality.py with expanded European surname detection
- Triggers GitOps workflow to test Forgejo Actions runner
2026-01-11 16:03:18 +01:00
kempersc
fd792fce2c Refactor code structure for improved readability and maintainability
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Deploy Frontend / build-and-deploy (push) Has been cancelled
2026-01-11 15:27:14 +01:00
kempersc
0f7fbf1ca0 feat(ci): add Forgejo Actions workflow for auto-deploy on LinkML schema changes
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Deploy Frontend / build-and-deploy (push) Waiting to run
Infrastructure changes to enable automatic frontend deployment when schemas change:

- Add .forgejo/workflows/deploy-frontend.yml workflow triggered by:
  - Changes to frontend/** or schemas/20251121/linkml/**
  - Manual workflow dispatch

- Rewrite generate-schema-manifest.cjs to properly scan all schema directories
  - Recursively scans classes, enums, slots, modules directories
  - Uses singular category names (class, enum, slot) matching TypeScript types
  - Includes all 4 main schemas at root level
  - Skips archive directories and backup files

- Update schema-loader.ts to match new manifest format
  - Add SchemaCategory interface
  - Update SchemaManifest to use categories as array
  - Add flattenCategories() helper function
  - Add getSchemaCategories() and getSchemaCategoriesSync() functions

The workflow builds frontend with updated manifest and deploys to bronhouder.nl
2026-01-11 14:16:57 +01:00
kempersc
0a888ec682 chore: add node_modules to .gitignore and remove from tracking
- Add node_modules/ and .pnpm-store/ to .gitignore
- Remove 76k node_modules files from git tracking
- Update frontend manifest
2026-01-11 00:41:21 +01:00
kempersc
a4184cb805 feat(infra): add webhook-based schema deployment pipeline
- Add FastAPI webhook receiver for Forgejo push events
- Add setup script for server deployment
- Add Caddy snippet for webhook endpoint
- Add local sync-schemas.sh helper script
- Sync frontend schemas with source (archived deprecated slots)

Infrastructure scripts staged for optional webhook deployment.
Current deployment uses: ./infrastructure/deploy.sh --frontend
2026-01-10 21:45:02 +01:00
kempersc
6c19ef8661 feat(rag): add Rule 46 epistemic provenance tracking
Track full lineage of RAG responses: WHERE data comes from, WHEN it was
retrieved, HOW it was processed (SPARQL/vector/LLM).

Backend changes:
- Add provenance.py with EpistemicProvenance, DataTier, SourceAttribution
- Integrate provenance into MultiSourceRetriever.merge_results()
- Return epistemic_provenance in DSPyQueryResponse

Frontend changes:
- Pass EpistemicProvenance through useMultiDatabaseRAG hook
- Display provenance in ConversationPage (for cache transparency)

Schema fixes:
- Fix truncated example in has_observation.yaml slot definition

References:
- Pavlyshyn's Context Graphs and Data Traces paper
- LinkML ProvenanceBlock schema pattern
2026-01-10 18:42:43 +01:00
kempersc
28c3aaf33f enrich profiles 2026-01-10 17:31:02 +01:00
kempersc
13938c92ca chore(schemas): sync LinkML schemas to frontend apps
Copies authoritative schemas from schemas/20251121/ to:
- frontend/public/schemas/20251121/
- apps/archief-assistent/public/schemas/20251121/

This ensures slot definitions with corrected ontology property
references (commit 2808dad6cd) are available to frontend apps.
2026-01-10 15:02:25 +01:00
kempersc
8a475d5c02 refactor(linkml): apply RiC-O slot naming conventions (Rule 39)
Rename slots to follow Records in Contexts (RiC-O) style naming:
- Add 'has_' prefix for possession predicates (has_acquisition_method)
- Add 'is_or_was_' prefix for temporal relationships
- Add 'has_or_had_' for bidirectional temporal relations

Key changes across 496 schema files:
- acquisition_method → has_acquisition_method
- acquisition_date → has_acquisition_date
- acquisition_source → has_acquisition_source
- access_policy_ref → has_access_policy_reference
- arrangement → has_arrangement
- parent_custodian → is_or_was_suborganization_of (hierarchy)
- parent_custodian → associated_custodian (event association)

Also adds new slots following RiC-O patterns:
- is_or_was_aggregated_by
- is_or_was_allocated_by
- is_or_was_archive_department_of
- was_approved_by, was_archived_at, was_asserted_by

This aligns with AGENTS.md Rule 39: Slot Naming Convention (RiC-O Style)
for accurate temporal semantics in heritage custodian ontology.

Net change: +2,063 lines (new slots added, old patterns consolidated)
2026-01-10 10:33:51 +01:00
kempersc
004d342935 chore: minor updates and evaluation results
- auth.setup.ts: require env vars for test credentials (no hardcoded defaults)
- manifest.json: update schema manifest
- full_evaluation_results.json: add RAG evaluation results
- petra-links.json: update birth date from web claim
2026-01-09 21:10:55 +01:00
kempersc
9e67d0f967 enrich profiles 2026-01-09 20:35:19 +01:00
kempersc
932ec5438c add person profiles with PPID 2026-01-09 18:26:58 +01:00
kempersc
0393b321c9 refactor(schema): unify custodian_type slots into has_or_had_custodian_type (Rule 39, 43)
- Migrate 236+ class files from custodian_types to has_or_had_custodian_type
- Archive deprecated slots: custodian_type, custodian_types, custodian_type_broader/narrower/related
- Update main schema and manifest imports
- Fix Custodian.yaml class to use new slot
- Fix annotation format (list→scalar) in has_or_had_custodian_type.yaml

Rules applied:
- Rule 39: RiC-O naming convention (hasOrHad pattern)
- Rule 43: Slot nouns must be singular (multivalued:true for cardinality)
- Rule 38: Slot centralization with semantic URI
2026-01-09 10:55:21 +01:00
kempersc
6608a207d4 update frontend 2026-01-08 15:56:28 +01:00
kempersc
9b769f1ca2 Update manifest timestamp and minor class fixes 2026-01-07 22:04:29 +01:00
kempersc
d19822f958 Remove redundant sections from class descriptions
- Created cleanup_class_descriptions_v2.py script using text-based regex
- Removed 134 class files' redundant sections:
  - dual_class_pattern: 80 occurrences
  - ontological_alignment: 35 occurrences
  - ontology_alignment_upper: 33 occurrences
  - multilingual_labels: 26 occurrences
  - glamorcubes_category: 6 occurrences
  - example_structure: 6 occurrences
- Fixed ArchiveOrganizationType.yaml parse error after cleanup
- Added 49 new slot definition files
- All 395 class files validate as correct YAML
- Deployed to bronhouder.nl/linkml
2026-01-07 13:50:14 +01:00
kempersc
dfa667c90f Fix LinkML schema for valid RDF generation with proper slot_uri
Summary:
- Create 46 missing slot definition files with proper slot_uri values
- Add slot imports to main schema (01_custodian_name_modular.yaml)
- Fix YAML examples sections in 116+ class and slot files
- Fix PersonObservation.yaml examples section (nested objects → string literals)

Technical changes:
- All slots now have explicit slot_uri mapping to base ontologies (RiC-O, Schema.org, SKOS)
- Eliminates malformed URIs like 'custodian/:slot_name' in generated RDF
- gen-owl now produces valid Turtle with 153,166 triples

New slot files (46):
- RiC-O slots: rico_note, rico_organizational_principle, rico_has_or_had_holder, etc.
- Scope slots: scope_includes, scope_excludes, archive_scope
- Organization slots: organization_type, governance_authority, area_served
- Platform slots: platform_type_category, portal_type_category
- Social media slots: social_media_platform_category, post_type_*
- Type hierarchy slots: broader_type, narrower_types, custodian_type_broader
- Wikidata slots: wikidata_equivalent, wikidata_mapping

Generated output:
- schemas/20251121/rdf/01_custodian_name_modular_20260107_134534_clean.owl.ttl (6.9MB)
- Validated with rdflib: 153,166 triples, no malformed URIs
2026-01-07 13:48:03 +01:00
kempersc
98c42bf272 Fix LinkML URI conflicts and generate RDF outputs
- Fix scope_note → finding_aid_scope_note in FindingAid.yaml
- Remove duplicate wikidata_entity slot from CustodianType.yaml (import instead)
- Remove duplicate rico_record_set_type from class_metadata_slots.yaml
- Fix range types for equals_string compatibility (uriorcurie → string)
- Move class names from close_mappings to see_also in 10 RecordSetTypes files
- Generate all RDF formats: OWL, N-Triples, RDF/XML, N3, JSON-LD context
- Sync schemas to frontend/public/schemas/

Files: 1,151 changed (includes prior CustodianType migration)
2026-01-07 12:32:59 +01:00
kempersc
11983014bb Enhance specificity scoring system integration with existing infrastructure
- Updated documentation to clarify integration points with existing components in the RAG pipeline and DSPy framework.
- Added detailed mapping of SPARQL templates to context templates for improved specificity filtering.
- Implemented wrapper patterns around existing classifiers to extend functionality without duplication.
- Introduced new tests for the SpecificityAwareClassifier and SPARQLToContextMapper to ensure proper integration and functionality.
- Enhanced the CustodianRDFConverter to include ISO country and subregion codes from GHCID for better geospatial data handling.
2026-01-05 17:37:49 +01:00
kempersc
41d8905661 Fix Turtle parser multi-line string handling for PiCo ontology
- Fixed bug where closing triple-quotes (""") would incorrectly re-trigger
  multi-line string detection, causing subsequent class definitions to be skipped
- Added lineToProcess variable to track which portion of line to process after
  closing a multi-line string, preventing re-detection of opening quotes
- Moved UML large diagram confirmation logic from OntologyViewerPage to
  UMLVisualization component for better encapsulation
- PiCo ontology now correctly shows all 8 classes instead of 2

Deployed and verified on https://bronhouder.nl/ontology?ontology=PiCo
2026-01-05 11:25:43 +01:00
kempersc
242bc8bb35 Add new slots for heritage custodian entities
- Created deliverables_slot for expected or achieved deliverable outputs.
- Introduced event_id_slot for persistent unique event identifiers.
- Added follow_up_date_slot for scheduled follow-up action dates.
- Implemented object_ref_slot for references to heritage objects.
- Established price_slot for price information across entities.
- Added price_currency_slot for currency codes in price information.
- Created protocol_slot for API protocol specifications.
- Introduced provenance_text_slot for full provenance entry text.
- Added record_type_slot for classification of record types.
- Implemented response_formats_slot for supported API response formats.
- Established status_slot for current status of entities or activities.
- Added FactualCountDisplay component for displaying count query results.
- Introduced ReplyTypeIndicator component for visualizing reply types.
- Created approval_date_slot for formal approval dates.
- Added authentication_required_slot for API authentication status.
- Implemented capacity_items_slot for maximum storage capacity.
- Established conservation_lab_slot for conservation laboratory information.
- Added cost_usd_slot for API operation costs in USD.
2026-01-05 00:49:05 +01:00
kempersc
2dca28d8c1 enrich CH entries with mission statements 2026-01-04 13:12:32 +01:00
kempersc
4f0cafe98a enrich HC profiles 2026-01-02 02:11:04 +01:00
kempersc
349f31ae6f enrich custodian profiles 2026-01-02 02:10:18 +01:00
kempersc
45e873ec0a enrich JP BE AR profiles 2025-12-30 23:07:03 +01:00
kempersc
d64f857aa9 add sparql validator and RAG injector 2025-12-30 03:43:31 +01:00
kempersc
ca219340f2 enrich entries 2025-12-26 14:30:31 +01:00
kempersc
5e8a432ef0 enrich japanese and dutch custodians 2025-12-23 18:08:45 +01:00
kempersc
a1fb6344e7 enriching custodian data 2025-12-23 17:26:29 +01:00
kempersc
0c1d19e98b enrich entries 2025-12-23 13:27:35 +01:00
kempersc
aca68ea47f remove a,bihguous web-claims 2025-12-21 00:01:54 +01:00
kempersc
23b1d8ee5f clean up GHCID 2025-12-17 11:58:40 +01:00
kempersc
99430c2a70 add new entries and semantic routing 2025-12-17 10:11:56 +01:00
kempersc
e0dd847491 extend ontology 2025-12-16 20:27:39 +01:00
kempersc
b0416efc7d enrich custodians and persons 2025-12-16 11:57:34 +01:00
kempersc
52ae711c56 add timespans 2025-12-16 09:02:52 +01:00
kempersc
b1340e30c8 add timespan 2025-12-15 22:35:35 +01:00
kempersc
cb56aa7e40 enrich all custodian timespan 2025-12-15 22:31:41 +01:00
kempersc
0a38225b36 feat(frontend): Add multi-select filters, URL params, and UI improvements
- Institution Browser: multi-select for types and countries
- URL query param sync for shareable filter URLs
- New utility: countryNames.ts with flag emoji support
- New utility: imageProxy.ts for image URL handling
- New component: SearchableMultiSelect dropdown
- Career timeline CSS and component updates
- Media gallery improvements
- Lazy load error boundary component
- Version check utility
2025-12-15 01:47:11 +01:00
kempersc
c50c35fd3a enrich person custodian 2025-12-14 17:09:55 +01:00
kempersc
505c12601a Add test script for PiCo extraction from Arabic waqf documents
- Implemented a new script `test_pico_arabic_waqf.py` to test the GLM annotator's ability to extract person observations from Arabic historical documents.
- The script includes environment variable handling for API token, structured prompts for the GLM API, and validation of extraction results.
- Added comprehensive logging for API responses, extraction results, and validation errors.
- Included a sample Arabic waqf text for testing purposes, following the PiCo ontology pattern.
2025-12-12 17:50:17 +01:00
kempersc
b1f93b6f22 enrich person profiles 2025-12-12 12:51:10 +01:00
kempersc
03263f67d6 moved web archives 2025-12-12 00:40:26 +01:00
kempersc
1b1cfbfca0 enrich custodians 2025-12-11 22:32:09 +01:00
kempersc
d4906abae4 update postgis data 2025-12-10 23:51:51 +01:00
kempersc
be3fbac601 enrich entries and persons 2025-12-10 18:04:25 +01:00
kempersc
41959f0766 correct HCID! 2025-12-10 13:01:13 +01:00
kempersc
3a6ead8fde feat: Add legal form filtering rule for CustodianName
- Introduced LEGAL-FORM-FILTER rule to standardize CustodianName by removing legal form designations.
- Documented rationale, examples, and implementation guidelines for the filtering process.

docs: Create README for value standardization rules

- Established a comprehensive README outlining various value standardization rules applicable to Heritage Custodian classes.
- Categorized rules into Name Standardization, Geographic Standardization, Web Observation, and Schema Evolution.

feat: Implement transliteration standards for non-Latin scripts

- Added TRANSLIT-ISO rule to ensure GHCID abbreviations are generated from emic names using ISO standards for transliteration.
- Included detailed guidelines for various scripts and languages, along with implementation examples.

feat: Define XPath provenance rules for web observations

- Created XPATH-PROVENANCE rule mandating XPath pointers for claims extracted from web sources.
- Established a workflow for archiving websites and verifying claims against archived HTML.

chore: Update records lifecycle diagram

- Generated a new Mermaid diagram illustrating the records lifecycle for heritage custodians.
- Included phases for active records, inactive archives, and processed heritage collections with key relationships and classifications.
2025-12-09 16:58:41 +01:00
kempersc
a7321b1bb9 reconstruct location blocks 2025-12-09 12:25:16 +01:00
kempersc
cab712659d recover location blocks 2025-12-09 11:34:56 +01:00