kempersc
a83f04d9c4
Refactor code structure for improved readability and maintainability
2026-02-02 15:57:17 +01:00
kempersc
fc405445c6
Refactor and update schema definitions
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- Removed obsolete slots: `has_or_had_custodian_observation`, `provider`, and `specificity_annotation`.
- Updated `has_or_had_score` slot to use `SpecificityScore` class and modified its description and examples.
- Added new slots: `end_seconds`, `end_time`, `has_archive_path`, `has_or_had_custodian_name`, `protocol_name`, and `protocol_version`.
- Introduced a script `check_annotation_types.py` to validate the presence and structure of `custodian_types` in YAML files.
- Added a script `update_specificity.py` to automate updates related to `SpecificityAnnotation` to `SpecificityScore`.
2026-02-01 19:55:38 +01:00
kempersc
7e0622c755
chore: clean up code structure and remove redundant changes
2026-01-31 21:24:53 +01:00
kempersc
0c5211e40a
removed convenience slots
2026-01-31 00:15:53 +01:00
kempersc
c60b523f29
Implement feature X to enhance user experience and fix bug Y in module Z
2026-01-29 00:12:27 +01:00
kempersc
f800e198ff
Refactor code structure for improved readability and maintainability
2026-01-28 01:11:55 +01:00
kempersc
1fb924c412
feat: add ontology mappings to LinkML schema and enhance entity resolution
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Schema enhancements (443 files):
- Add class_uri with proper ontology references (schema:, prov:, skos:, rico:)
- Add close_mappings, related_mappings per Rule 50 convention
- Replace stub hc: slot_uri with standard predicates (dcterms:identifier, skos:prefLabel)
- Improve descriptions with ontology mapping rationale
- Add prefixes blocks to all schema modules
Entity Resolution improvements:
- Add entity_resolution module with email semantics parsing
- Enhance build_entity_resolution.py with email-based matching signals
- Extend Entity Review API with filtering by signal types and count
- Add candidates caching and indexing for performance
- Add ReviewLoginPage component
New rules and documentation:
- Add Rule 51: No Hallucinated Ontology References
- Add .opencode/rules/no-hallucinated-ontology-references.md
- Add .opencode/rules/slot-ontology-mapping-reference.md
- Add adms.ttl and dqv.ttl ontology files
Frontend ontology support:
- Add RiC-O_1-1.rdf and schemaorg.owl to public/ontology
2026-01-13 13:51:02 +01:00
kempersc
6608a207d4
update frontend
2026-01-08 15:56:28 +01:00
