69a22e2b5a
- Deleted the `rights_statement_url` slot definition as it is no longer needed. - Added multiple new slots including `has_legal_basis`, `has_statement`, `impose`, `pose_condition`, and `reviewed_through` with detailed descriptions and ontology alignments. - Updated existing slots to improve clarity and consistency, including renaming `close_mappings` to `related_mappings` in several definitions. - Enhanced the `require` slot with additional aliases for better usability. - Improved documentation and comments across all slot definitions to clarify their purpose and usage.
99 lines
4.2 KiB
YAML
99 lines
4.2 KiB
YAML
id: https://nde.nl/ontology/hc/class/TaxonomicAuthority
|
|
name: TaxonomicAuthority
|
|
title: Taxonomic Authority Class
|
|
description: "Structured representation of taxonomic name authorship.\n\nModels the authorship information for scientific names following\nnomenclatural codes (ICZN for animals, ICN for plants, ICNP for bacteria).\n\n**MIGRATION**: Created to support `has_authority` slot per slot_fixes.yaml\n(Rule 53/56, 2026-01-16). Replaces unstructured `taxonomic_authority` string values.\n\n**Ontology Alignment**:\n- class_uri: prov:Attribution (provenance attribution)\n- Aligns with TCS (Taxon Concept Schema) authorship elements\n- Maps to Darwin Core scientificNameAuthorship\n\n**Key Properties**:\n- has_label: The full authority string (e.g., \"Linnaeus, 1758\")\n- has_author: Author name(s) as separate elements\n- has_date: Publication year\n- recombined: Whether parentheses indicate recombination\n\n**Nomenclatural Codes**:\n\n| Code | Domain | Example |\n|------|--------|---------|\n| ICZN | Animals | \"Linnaeus, 1758\" |\n| ICN | Plants/Algae/Fungi | \"L.\"\
|
|
\ (abbreviated) |\n| ICNP | Prokaryotes | \"(Migula 1900) Skerman et al. 1980\" |\n| ICVCN | Viruses | \"ICTV 2020\" |\n\n**Example**:\n```yaml\nauthority:\n has_label: \"Linnaeus, 1758\"\n has_author: [\"Carl Linnaeus\"]\n has_date: 1758\n recombined: false\n nomenclatural_code: ICZN\n```\n"
|
|
prefixes:
|
|
linkml: https://w3id.org/linkml/
|
|
hc: https://nde.nl/ontology/hc/
|
|
prov: http://www.w3.org/ns/prov#
|
|
dwc: http://rs.tdwg.org/dwc/terms/
|
|
schema: http://schema.org/
|
|
skos: http://www.w3.org/2004/02/skos/core#
|
|
imports:
|
|
- linkml:types
|
|
- ../slots/20260202_matang/has_author
|
|
- ../slots/20260202_matang/has_description
|
|
- ../slots/20260202_matang/identified_by
|
|
- ../slots/20260202_matang/has_label
|
|
- ../slots/20260202_matang/recombined
|
|
- ../slots/20260202_matang/new/nomenclatural_code
|
|
default_prefix: hc
|
|
classes:
|
|
TaxonomicAuthority:
|
|
class_uri: prov:Attribution
|
|
description: 'Structured representation of taxonomic name authorship.
|
|
Provides detailed breakdown of author names, dates, and nomenclatural
|
|
status beyond a simple string representation.
|
|
'
|
|
exact_mappings:
|
|
- prov:Attribution
|
|
close_mappings:
|
|
- dwc:scientificNameAuthorship
|
|
- schema:CreativeWork
|
|
slots:
|
|
- identified_by
|
|
- has_label
|
|
- has_description
|
|
- has_author
|
|
slot_usage:
|
|
identified_by:
|
|
examples:
|
|
- value: urn:lsid:zoobank.org:act:12345678-1234-1234-1234-123456789012
|
|
has_label:
|
|
required: true
|
|
examples:
|
|
- value: Linnaeus, 1758
|
|
- value: (Gray, 1821)
|
|
- value: L.
|
|
- value: (Migula 1900) Skerman et al. 1980
|
|
has_author:
|
|
multivalued: true
|
|
examples:
|
|
- value:
|
|
- Carl Linnaeus
|
|
- value:
|
|
- Asa Gray
|
|
- value:
|
|
- Skerman
|
|
- McGowan
|
|
- Sneath
|
|
- value: 1758
|
|
has_description:
|
|
examples:
|
|
- value: Original description in Systema Naturae, 10th edition
|
|
- value: true
|
|
comments:
|
|
- TaxonomicAuthority provides structured representation of authorship
|
|
- The has_label slot holds the conventional formatted string
|
|
- Use recombined to indicate parenthetical authorities
|
|
- Link to nomenclatural databases via identified_by
|
|
see_also:
|
|
- https://www.iczn.org/
|
|
- https://www.iapt-taxon.org/nomen/main.php
|
|
- https://dwc.tdwg.org/terms/#dwc:scientificNameAuthorship
|
|
examples:
|
|
- value:
|
|
has_label: Linnaeus, 1758
|
|
has_author:
|
|
- Carl Linnaeus
|
|
has_description: Original description of Homo sapiens in Systema Naturae, 10th edition
|
|
- value:
|
|
has_label: (Gray, 1821)
|
|
has_author:
|
|
- John Edward Gray
|
|
- value:
|
|
has_label: L.
|
|
has_author:
|
|
- Carl Linnaeus
|
|
has_description: Abbreviated botanical authority per ICN conventions
|
|
- value:
|
|
has_label: (Migula 1900) Skerman et al. 1980
|
|
has_author:
|
|
- Skerman
|
|
- McGowan
|
|
- Sneath
|
|
annotations:
|
|
specificity_score: 0.1
|
|
specificity_rationale: Generic utility class/slot created during migration
|
|
custodian_types: "['*']"
|