76 lines
4.9 KiB
Text
76 lines
4.9 KiB
Text
Traceback (most recent call last):
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File "/Users/kempersc/miniconda3/bin/linkml-validate", line 8, in <module>
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sys.exit(cli())
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^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/click/core.py", line 1157, in __call__
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return self.main(*args, **kwargs)
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^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/click/core.py", line 1078, in main
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rv = self.invoke(ctx)
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^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/click/core.py", line 1434, in invoke
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return ctx.invoke(self.callback, **ctx.params)
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^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/click/core.py", line 783, in invoke
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return __callback(*args, **kwargs)
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^^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/click/decorators.py", line 33, in new_func
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return f(get_current_context(), *args, **kwargs)
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^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/linkml/validator/cli.py", line 195, in cli
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for result in validator.iter_results_from_source(loader, config.target_class):
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/linkml/validator/validator.py", line 106, in iter_results_from_source
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for index, instance in enumerate(loader.iter_instances()):
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/linkml/validator/loaders/yaml_loader.py", line 28, in iter_instances
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for document in yaml.safe_load_all(source_file):
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/__init__.py", line 93, in load_all
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yield loader.get_data()
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^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/constructor.py", line 45, in get_data
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return self.construct_document(self.get_node())
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^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/composer.py", line 27, in get_node
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return self.compose_document()
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^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/composer.py", line 55, in compose_document
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node = self.compose_node(None, None)
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^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/composer.py", line 82, in compose_node
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node = self.compose_sequence_node(anchor)
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^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/composer.py", line 111, in compose_sequence_node
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node.value.append(self.compose_node(node, index))
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^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/composer.py", line 84, in compose_node
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node = self.compose_mapping_node(anchor)
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^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/composer.py", line 133, in compose_mapping_node
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item_value = self.compose_node(node, item_key)
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^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/composer.py", line 82, in compose_node
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node = self.compose_sequence_node(anchor)
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^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/composer.py", line 111, in compose_sequence_node
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node.value.append(self.compose_node(node, index))
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^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/composer.py", line 84, in compose_node
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node = self.compose_mapping_node(anchor)
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^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/composer.py", line 127, in compose_mapping_node
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while not self.check_event(MappingEndEvent):
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^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/parser.py", line 98, in check_event
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self.current_event = self.state()
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^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/parser.py", line 428, in parse_block_mapping_key
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if self.check_token(KeyToken):
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^^^^^^^^^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/scanner.py", line 116, in check_token
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self.fetch_more_tokens()
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/scanner.py", line 223, in fetch_more_tokens
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return self.fetch_value()
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^^^^^^^^^^^^^^^^^^
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File "/Users/kempersc/miniconda3/lib/python3.12/site-packages/yaml/scanner.py", line 577, in fetch_value
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raise ScannerError(None, None,
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yaml.scanner.ScannerError: mapping values are not allowed here
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in "data/instances/algeria/algerian_institutions.yaml", line 85, column 41
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