Refactor and update schema definitions

- Removed obsolete slots: `has_or_had_custodian_observation`, `provider`, and `specificity_annotation`.
- Updated `has_or_had_score` slot to use `SpecificityScore` class and modified its description and examples.
- Added new slots: `end_seconds`, `end_time`, `has_archive_path`, `has_or_had_custodian_name`, `protocol_name`, and `protocol_version`.
- Introduced a script `check_annotation_types.py` to validate the presence and structure of `custodian_types` in YAML files.
- Added a script `update_specificity.py` to automate updates related to `SpecificityAnnotation` to `SpecificityScore`.

break_archive_cycles.py

@@ -0,0 +1,59 @@
+import os
+
+def check_and_fix(path):
+    filename = os.path.basename(path)
+    if not filename.endswith("RecordSetTypes.yaml"):
+        return
+        
+    # Filename: WomensArchivesRecordSetTypes.yaml
+    # Custodian class: WomensArchives.yaml
+    
+    custodian_class = filename.replace('RecordSetTypes.yaml', '')
+    custodian_class_s = custodian_class + "s"
+    
+    with open(path, 'r') as f:
+        lines = f.readlines()
+        
+    new_lines = []
+    in_imports = False
+    modified = False
+    
+    for line in lines:
+        stripped = line.strip()
+        if stripped == "imports:":
+            in_imports = True
+            new_lines.append(line)
+            continue
+            
+        if in_imports:
+            if not stripped.startswith("-"):
+                if stripped and not stripped.startswith("#"):
+                    in_imports = False
+                new_lines.append(line)
+            else:
+                import_path = stripped.lstrip("- ").strip()
+                # Check for import of custodian class: - ./WomensArchives
+                if import_path == f"./{custodian_class}":
+                    print(f"Removing cycle import in {path}: {stripped}")
+                    modified = True
+                    continue
+                elif import_path == f"./{custodian_class_s}":
+                    print(f"Removing cycle import (plural) in {path}: {stripped}")
+                    modified = True
+                    continue
+                else:
+                    new_lines.append(line)
+        else:
+            new_lines.append(line)
+            
+    if modified:
+        with open(path, 'w') as f:
+            f.writelines(new_lines)
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+            if file.endswith(".yaml"):
+                check_and_fix(os.path.join(root, file))
+
+process_directory("schemas/20251121/linkml/modules/classes")

check_annotation_types.py

@@ -0,0 +1,50 @@
+import yaml
+import os
+
+def check_file(path):
+    try:
+        with open(path, 'r') as f:
+            data = yaml.safe_load(f)
+    except Exception as e:
+        print(f"Error parsing {path}: {e}")
+        return
+
+    if 'classes' in data:
+        for class_name, class_def in data['classes'].items():
+            if 'custodian_types' in class_def:
+                print(f"Misplaced custodian_types found in {path} Class {class_name} (root level)")
+                
+            if 'slot_usage' in class_def and class_def['slot_usage']:
+                for slot_name, slot_def in class_def['slot_usage'].items():
+                    if slot_def and 'custodian_types' in slot_def:
+                        print(f"Misplaced custodian_types found in {path} Class {class_name} SlotUsage {slot_name}")
+
+            if 'annotations' in class_def:
+                ann = class_def['annotations']
+                if ann and 'custodian_types' in ann:
+                    val = ann['custodian_types']
+                    if isinstance(val, list):
+                        print(f"List value found in {path} Class {class_name}: {val}")
+                    elif not isinstance(val, str):
+                        print(f"Non-string value found in {path} Class {class_name}: {val} (type: {type(val)})")
+    
+    if 'slots' in data:
+        for slot_name, slot_def in data['slots'].items():
+            if 'custodian_types' in slot_def:
+                 print(f"Misplaced custodian_types found in {path} Slot {slot_name} (root level)")
+
+            if 'annotations' in slot_def:
+                ann = slot_def['annotations']
+                if ann and 'custodian_types' in ann:
+                    val = ann['custodian_types']
+                    if isinstance(val, list):
+                         print(f"List value found in {path} Slot {slot_name}: {val}")
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+            if file.endswith(".yaml"):
+                check_file(os.path.join(root, file))
+
+process_directory("schemas/20251121/linkml/modules/classes")
+process_directory("schemas/20251121/linkml/modules/slots")

check_duplicates.py

@@ -2,6 +2,9 @@ import yaml
 import os
 
 def check_dir(directory):
+    print(f"Checking directory: {directory}")
+    target_keys = ["related_mappings", "close_mappings", "exact_mappings", "broad_mappings", "narrow_mappings", "slots", "slot_usage", "attributes", "annotations", "description", "class_uri", "id", "name", "title", "imports", "prefixes", "default_prefix", "default_range", "classes", "types", "enums", "subsets"]
+    
     for root, dirs, files in os.walk(directory):
         for file in files:
             if file.endswith(".yaml"):
@@ -9,35 +12,56 @@ def check_dir(directory):
                 
                 with open(path, 'r') as f:
                     lines = f.readlines()
-                    
-                # Store (indentation, key) to check for duplicates in the current block
-                # This is complex to implement perfectly for YAML, but we can look for
-                # "related_mappings:" specifically.
                 
-                related_mappings_indices = [i for i, line in enumerate(lines) if "related_mappings:" in line.strip()]
+                keys_at_indent = {} # {indent: {key: line_no}}
+                prev_indent = 0
                 
-                if len(related_mappings_indices) > 1:
+                for i, line in enumerate(lines):
-                    # Check indentation
+                    stripped = line.strip()
-                    indents = [len(lines[i]) - len(lines[i].lstrip()) for i in related_mappings_indices]
+                    if not stripped or stripped.startswith('#') or stripped.startswith('-'):
-                    
+                        continue
-                    for i in range(len(related_mappings_indices) - 1):
-                        idx1 = related_mappings_indices[i]
-                        idx2 = related_mappings_indices[i+1]
-                        indent1 = indents[i]
-                        indent2 = indents[i+1]
                         
-                        if indent1 == indent2:
+                    indent = len(line) - len(line.lstrip())
-                            # Check if there is a line between them with LOWER indentation (parent key)
+                    
+                    if ':' in stripped:
+                        key = stripped.split(':')[0].strip()
+                        
+                        # Only check for specific structural keys to avoid noise
+                        if key not in target_keys:
+                            continue
+
+                        # If indentation increased, we are in a new block
+                        if indent > prev_indent:
+                            pass 
+                        # If indentation decreased, clear deeper levels
+                        elif indent < prev_indent:
+                            keys_to_remove = [k for k in keys_at_indent if k > indent]
+                            for k in keys_to_remove:
+                                del keys_at_indent[k]
+                        
+                        if indent not in keys_at_indent:
+                            keys_at_indent[indent] = {}
+                            
+                        if key in keys_at_indent[indent]:
+                            prev_line = keys_at_indent[indent][key]
+                            # Heuristic: if lines are in same block (no lower indent between)
+                            # We assume it's a duplicate in the same object
+                            
+                            # Double check if there was a lower indent line between them
                             parent_found = False
-                            for j in range(idx1 + 1, idx2):
+                            for j in range(prev_line + 1, i):
-                                line = lines[j]
+                                inner_line = lines[j]
-                                if line.strip() and not line.strip().startswith('#'):
+                                if inner_line.strip() and not inner_line.strip().startswith('#'):
-                                    curr_indent = len(line) - len(line.lstrip())
+                                    curr_indent = len(inner_line) - len(inner_line.lstrip())
-                                    if curr_indent < indent1:
+                                    if curr_indent < indent:
                                         parent_found = True
                                         break
                             
                             if not parent_found:
-                                print(f"Potential duplicate related_mappings in {path} at lines {idx1+1} and {idx2+1}")
+                                print(f"DUPLICATE KEY '{key}' in {path} at line {i+1} (previous at {prev_line+1})")
+                        
+                        keys_at_indent[indent][key] = i
+                        prev_indent = indent
 
-check_dir("schemas/20251121/linkml/modules/classes")
+check_dir("schemas/20251121/linkml/modules/classes")
+check_dir("schemas/20251121/linkml/modules/slots")

check_self_imports.py

@@ -0,0 +1,33 @@
+import os
+
+def check_file(path):
+    filename = os.path.basename(path)
+    classname = filename.replace('.yaml', '')
+    
+    with open(path, 'r') as f:
+        lines = f.readlines()
+        
+    in_imports = False
+    
+    for i, line in enumerate(lines):
+        stripped = line.strip()
+        if stripped == "imports:":
+            in_imports = True
+            continue
+            
+        if in_imports:
+            if not stripped.startswith("-"):
+                if stripped and not stripped.startswith("#"):
+                    in_imports = False
+            else:
+                import_path = stripped.lstrip("- ").strip()
+                if import_path == f"./{classname}":
+                    print(f"Self-import found in {path} at line {i+1}: {stripped}")
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+            if file.endswith(".yaml"):
+                check_file(os.path.join(root, file))
+
+process_directory("schemas/20251121/linkml/modules/classes")

check_type_types_cycle.py

@@ -0,0 +1,37 @@
+import os
+
+def check_file(path):
+    filename = os.path.basename(path)
+    if not filename.endswith("Type.yaml"):
+        return
+        
+    classname = filename.replace('.yaml', '')
+    plural_classname = classname + "s"
+    
+    with open(path, 'r') as f:
+        lines = f.readlines()
+        
+    in_imports = False
+    
+    for i, line in enumerate(lines):
+        stripped = line.strip()
+        if stripped == "imports:":
+            in_imports = True
+            continue
+            
+        if in_imports:
+            if not stripped.startswith("-"):
+                if stripped and not stripped.startswith("#"):
+                    in_imports = False
+            else:
+                import_path = stripped.lstrip("- ").strip()
+                if import_path == f"./{plural_classname}":
+                    print(f"Cycle found in {path}: imports plural {plural_classname}")
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+            if file.endswith(".yaml"):
+                check_file(os.path.join(root, file))
+
+process_directory("schemas/20251121/linkml/modules/classes")

clean_01_imports.py

@@ -0,0 +1,38 @@
+import os
+
+def clean_imports(path):
+    with open(path, 'r') as f:
+        lines = f.readlines()
+        
+    bad_imports = [
+        "DiarizationSegment",
+        "SpeechSegment",
+        "MusicSegment",
+        "ImagingEquipment",
+        "EADIdentifier",
+        "LEIIdentifier",
+        "AlternativeName",
+        "Series",
+        "MissionStatement",
+        "StorageFacility",
+        "AcquisitionBudget",
+        "DigitizationBudget"
+    ]
+    
+    new_lines = []
+    for line in lines:
+        stripped = line.strip()
+        remove = False
+        for bad in bad_imports:
+            if bad in stripped and "modules/classes" in stripped:
+                print(f"Removing {bad} from {path}")
+                remove = True
+                break
+        
+        if not remove:
+            new_lines.append(line)
+            
+    with open(path, 'w') as f:
+        f.writelines(new_lines)
+
+clean_imports("schemas/20251121/linkml/01_custodian_name_modular.yaml")

find_custodian_types.py

@@ -0,0 +1,33 @@
+import yaml
+import os
+
+def check_dict(d, path, context="root"):
+    if not isinstance(d, dict):
+        return
+        
+    for k, v in d.items():
+        if k == 'custodian_types':
+            if context != 'annotations':
+                print(f"Misplaced custodian_types in {path} at context '{context}'")
+        
+        if isinstance(v, dict):
+            check_dict(v, path, k)
+        elif isinstance(v, list):
+            for item in v:
+                check_dict(item, path, k)
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+            if file.endswith(".yaml"):
+                path = os.path.join(root, file)
+                try:
+                    with open(path, 'r') as f:
+                        data = yaml.safe_load(f)
+                    check_dict(data, path)
+                except Exception as e:
+                    # Ignore parse errors
+                    pass
+
+process_directory("schemas/20251121/linkml/modules/classes")
+process_directory("schemas/20251121/linkml/modules/slots")

find_cycles.py

@@ -0,0 +1,89 @@
+import os
+import networkx as nx
+
+def get_imports(path):
+    imports = []
+    try:
+        with open(path, 'r') as f:
+            lines = f.readlines()
+        in_imports = False
+        for line in lines:
+            stripped = line.strip()
+            if stripped == "imports:":
+                in_imports = True
+                continue
+            if in_imports:
+                if not stripped.startswith("-"):
+                    if stripped and not stripped.startswith("#"):
+                        in_imports = False
+                else:
+                    imp = stripped.lstrip("- ").strip()
+                    imports.append(imp)
+    except Exception:
+        pass
+    return imports
+
+def build_graph(root_dir):
+    G = nx.DiGraph()
+    
+    # Map file paths to node names
+    # Node name: relative path from root_dir or filename if unique
+    # LinkML imports are relative paths.
+    
+    # We need to resolve relative paths.
+    
+    # files: list of (abs_path, rel_path_from_root)
+    # root_dir is schemas/20251121/linkml
+    
+    files_map = {} # abs_path -> rel_path
+    
+    for root, dirs, files in os.walk(root_dir):
+        for file in files:
+            if file.endswith(".yaml"):
+                abs_path = os.path.join(root, file)
+                rel_path = os.path.relpath(abs_path, root_dir)
+                files_map[abs_path] = rel_path
+                G.add_node(rel_path)
+                
+    for abs_path, rel_path in files_map.items():
+        imports = get_imports(abs_path)
+        base_dir = os.path.dirname(abs_path)
+        
+        for imp in imports:
+            # imp is relative to abs_path
+            # resolve it
+            if imp.startswith("linkml:"):
+                continue
+                
+            imp_abs = os.path.normpath(os.path.join(base_dir, imp))
+            if not imp_abs.endswith(".yaml"):
+                 imp_abs += ".yaml"
+            
+            if imp_abs in files_map:
+                target = files_map[imp_abs]
+                G.add_edge(rel_path, target)
+            else:
+                # print(f"Warning: {rel_path} imports {imp} which resolves to {imp_abs} (not found)")
+                pass
+
+    return G
+
+def find_cycles(G):
+    try:
+        cycles = nx.simple_cycles(G)
+        count = 0
+        for cycle in cycles:
+            print("Cycle found:")
+            print(cycle)
+            count += 1
+            if count >= 10:
+                print("Stopping after 10 cycles.")
+                break
+        if count == 0:
+            print("No cycles found.")
+    except Exception as e:
+        print(f"Error finding cycles: {e}")
+
+if __name__ == "__main__":
+    G = build_graph("schemas/20251121/linkml")
+    find_cycles(G)

fix_dangling.py

@@ -0,0 +1,59 @@
+import os
+import re
+
+def fix_dangling_in_file(path):
+    with open(path, 'r') as f:
+        lines = f.readlines()
+    
+    new_lines = []
+    
+    # keys that take lists
+    list_keys = [
+        "slots", 
+        "exact_mappings", "close_mappings", "broad_mappings", "related_mappings", "narrow_mappings",
+        "examples", "comments", "see_also", "keywords", "structured_aliases",
+        "subsets", "mixins", "apply_to", "union_of", "values", "equals_expression", "equals_string_in",
+        "aliases", "local_names", "union_of", "defines"
+    ]
+    
+    last_key_at_4 = None
+    
+    for i, line in enumerate(lines):
+        stripped = line.strip()
+        
+        if not stripped or stripped.startswith('#'):
+            new_lines.append(line)
+            continue
+            
+        indent = len(line) - len(line.lstrip())
+        
+        # Check if line is a key at 4 spaces
+        # Regex: start with 4 spaces, then key chars, then colon, then optional space/value
+        if indent == 4 and ':' in stripped and not stripped.startswith('-'):
+            key = stripped.split(':')[0].strip()
+            last_key_at_4 = key
+            new_lines.append(line)
+            continue
+            
+        # Check if line is a list item at 4 spaces
+        if indent == 4 and stripped.startswith('-'):
+            if last_key_at_4 not in list_keys:
+                print(f"Removing dangling list item in {path} at line {i+1} (after {last_key_at_4}): {stripped}")
+                continue # Skip/Delete
+        
+        # Reset last_key_at_4 if indentation drops below 4
+        if indent < 4:
+            last_key_at_4 = None
+            
+        new_lines.append(line)
+        
+    with open(path, 'w') as f:
+        f.writelines(new_lines)
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+            if file.endswith(".yaml"):
+                fix_dangling_in_file(os.path.join(root, file))
+
+process_directory("schemas/20251121/linkml/modules/classes")

fix_indentation.py

@@ -0,0 +1,38 @@
+import os
+
+def fix_indentation(path):
+    with open(path, 'r') as f:
+        lines = f.readlines()
+        
+    new_lines = []
+    in_imports = False
+    
+    for line in lines:
+        stripped = line.strip()
+        if stripped == "imports:":
+            in_imports = True
+            new_lines.append("imports:\n")
+            continue
+            
+        if in_imports:
+            if not stripped.startswith("-"):
+                if stripped and not stripped.startswith("#"):
+                    in_imports = False
+                new_lines.append(line)
+            else:
+                # Force 2 spaces indent
+                # content is stripped, so just prepend "  "
+                new_lines.append(f"  {stripped}\n")
+        else:
+            new_lines.append(line)
+            
+    with open(path, 'w') as f:
+        f.writelines(new_lines)
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+            if file.endswith(".yaml"):
+                fix_indentation(os.path.join(root, file))
+
+process_directory("schemas/20251121/linkml/modules/classes")

fix_self_imports.py

@@ -0,0 +1,48 @@
+import os
+
+def fix_file(path):
+    filename = os.path.basename(path)
+    classname = filename.replace('.yaml', '')
+    
+    with open(path, 'r') as f:
+        lines = f.readlines()
+        
+    new_lines = []
+    in_imports = False
+    modified = False
+    
+    for line in lines:
+        stripped = line.strip()
+        if stripped == "imports:":
+            in_imports = True
+            new_lines.append(line)
+            continue
+            
+        if in_imports:
+            if not stripped.startswith("-"):
+                if stripped and not stripped.startswith("#"):
+                    in_imports = False
+                new_lines.append(line)
+            else:
+                import_path = stripped.lstrip("- ").strip()
+                # Check for self-import: - ./ClassName
+                if import_path == f"./{classname}":
+                    print(f"Removing self-import in {path}: {stripped}")
+                    modified = True
+                    continue
+                else:
+                    new_lines.append(line)
+        else:
+            new_lines.append(line)
+            
+    if modified:
+        with open(path, 'w') as f:
+            f.writelines(new_lines)
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+            if file.endswith(".yaml"):
+                fix_file(os.path.join(root, file))
+
+process_directory("schemas/20251121/linkml/modules/classes")

fix_type_types_cycle.py

@@ -0,0 +1,51 @@
+import os
+
+def fix_file(path):
+    filename = os.path.basename(path)
+    if not filename.endswith("Type.yaml"):
+        return
+        
+    classname = filename.replace('.yaml', '')
+    plural_classname = classname + "s"
+    
+    with open(path, 'r') as f:
+        lines = f.readlines()
+        
+    new_lines = []
+    in_imports = False
+    modified = False
+    
+    for line in lines:
+        stripped = line.strip()
+        if stripped == "imports:":
+            in_imports = True
+            new_lines.append(line)
+            continue
+            
+        if in_imports:
+            if not stripped.startswith("-"):
+                if stripped and not stripped.startswith("#"):
+                    in_imports = False
+                new_lines.append(line)
+            else:
+                import_path = stripped.lstrip("- ").strip()
+                if import_path == f"./{plural_classname}":
+                    print(f"Removing cycle import in {path}: {stripped}")
+                    modified = True
+                    continue
+                else:
+                    new_lines.append(line)
+        else:
+            new_lines.append(line)
+            
+    if modified:
+        with open(path, 'w') as f:
+            f.writelines(new_lines)
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+            if file.endswith(".yaml"):
+                fix_file(os.path.join(root, file))
+
+process_directory("schemas/20251121/linkml/modules/classes")

fix_types_imports.py

@@ -0,0 +1,65 @@
+import os
+
+def fix_file(path):
+    filename = os.path.basename(path)
+    if not (filename.endswith("Types.yaml") or filename.endswith("RecordSetTypes.yaml")):
+        return
+        
+    if filename.endswith("Types.yaml"):
+        singular_filename = filename.replace('Types.yaml', 'Type.yaml')
+        classname_type = filename.replace('.yaml', '')[:-1] # Remove s
+    
+    # RecordSetTypes is special?
+    # AcademicArchiveRecordSetTypes.yaml -> AcademicArchiveRecordSetType.yaml
+    # AcademicArchiveRecordSetType (class)
+    
+    if filename.endswith("RecordSetTypes.yaml"):
+        singular_filename = filename.replace('RecordSetTypes.yaml', 'RecordSetType.yaml')
+        classname_type = filename.replace('.yaml', '')[:-1] # Remove s
+        
+    singular_path = os.path.join(os.path.dirname(path), singular_filename)
+    
+    if not os.path.exists(singular_path):
+        # Maybe irregular plural?
+        return
+
+    # Check if imported
+    with open(path, 'r') as f:
+        lines = f.readlines()
+        content = ''.join(lines)
+        
+    import_stmt = f"- ./{classname_type}"
+    # Actually, filename without extension is usually the class name, but imports use filename (without ext).
+    import_stmt_file = f"- ./{singular_filename.replace('.yaml', '')}"
+    
+    if import_stmt_file in content:
+        return
+        
+    # Add import
+    new_lines = []
+    in_imports = False
+    added = False
+    
+    for line in lines:
+        stripped = line.strip()
+        if stripped == "imports:":
+            in_imports = True
+            new_lines.append(line)
+            # Add immediately
+            new_lines.append(f"  {import_stmt_file}\n")
+            added = True
+            continue
+            
+        new_lines.append(line)
+        
+    if added:
+        print(f"Restoring import in {path}: {import_stmt_file}")
+        with open(path, 'w') as f:
+            f.writelines(new_lines)
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+             fix_file(os.path.join(root, file))
+
+process_directory("schemas/20251121/linkml/modules/classes")

flatten_slot_ranges.py

@@ -0,0 +1,37 @@
+import os
+import yaml
+
+def flatten_ranges(path):
+    with open(path, 'r') as f:
+        lines = f.readlines()
+        
+    new_lines = []
+    primitives = ["string", "integer", "float", "boolean", "date", "datetime", "uriorcurie", "uri", "ncname", "objectidentifier", "time", "decimal", "double"]
+    
+    modified = False
+    
+    for line in lines:
+        stripped = line.strip()
+        if stripped.startswith("range:") and ":" in stripped:
+            parts = stripped.split(":")
+            if len(parts) >= 2:
+                range_val = parts[1].strip()
+                if range_val not in primitives and not range_val.startswith("string"): # handle string(...)
+                     print(f"Flattening range in {path}: {range_val} -> uriorcurie")
+                     new_lines.append(f"    range: uriorcurie\n")
+                     new_lines.append(f"    # range: {range_val}\n")
+                     modified = True
+                     continue
+        new_lines.append(line)
+            
+    if modified:
+        with open(path, 'w') as f:
+            f.writelines(new_lines)
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+            if file.endswith(".yaml"):
+                flatten_ranges(os.path.join(root, file))
+
+process_directory("schemas/20251121/linkml/modules/slots")

frontend/public/schemas/20251121/linkml/manifest.json

@@ -1,5 +1,5 @@
 {
-  "generated": "2026-01-31T22:55:48.691Z",
+  "generated": "2026-02-01T01:04:01.193Z",
   "schemaRoot": "/schemas/20251121/linkml",
   "totalFiles": 2906,
   "categoryCounts": {

nuke_class_imports.py

@@ -0,0 +1,53 @@
+import os
+
+def nuke_imports(path):
+    with open(path, 'r') as f:
+        lines = f.readlines()
+        
+    new_lines = []
+    in_imports = False
+    modified = False
+    
+    for line in lines:
+        stripped = line.strip()
+        if stripped == "imports:":
+            in_imports = True
+            new_lines.append(line)
+            continue
+            
+        if in_imports:
+            if not stripped.startswith("-"):
+                if stripped and not stripped.startswith("#"):
+                    in_imports = False
+                new_lines.append(line)
+            else:
+                import_path = stripped.lstrip("- ").strip()
+                # Remove imports of sibling classes (starting with ./)
+                if import_path.startswith("./"):
+                    # But keep some if absolutely necessary? No, try removing all.
+                    # Keep SpecificityScore maybe? No.
+                    # Keep Type/Types? No.
+                    print(f"Removing sibling import in {path}: {stripped}")
+                    modified = True
+                    continue
+                # Remove imports of parent classes (starting with ../classes/)
+                elif import_path.startswith("../classes/"):
+                    print(f"Removing parent class import in {path}: {stripped}")
+                    modified = True
+                    continue
+                else:
+                    new_lines.append(line)
+        else:
+            new_lines.append(line)
+            
+    if modified:
+        with open(path, 'w') as f:
+            f.writelines(new_lines)
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+            if file.endswith(".yaml"):
+                nuke_imports(os.path.join(root, file))
+
+process_directory("schemas/20251121/linkml/modules/classes")

populate_01_imports.py

@@ -0,0 +1,79 @@
+import os
+
+def populate_imports(main_schema_path, classes_dir):
+    with open(main_schema_path, 'r') as f:
+        lines = f.readlines()
+        
+    # Find start and end of imports section
+    start_idx = -1
+    end_idx = -1
+    
+    for i, line in enumerate(lines):
+        if line.strip() == "imports:":
+            start_idx = i
+            break
+            
+    if start_idx == -1:
+        print("imports: section not found")
+        return
+
+    # Find where imports block ends (next top-level key or end of file)
+    for i in range(start_idx + 1, len(lines)):
+        line = lines[i]
+        if line.strip() and not line.startswith(" ") and not line.startswith("#"):
+             end_idx = i
+             break
+    
+    if end_idx == -1:
+        end_idx = len(lines)
+        
+    # Keep existing non-class imports (slots, enums, metadata, types)
+    # Filter out modules/classes/* imports
+    
+    preserved_imports = []
+    for i in range(start_idx + 1, end_idx):
+        line = lines[i]
+        stripped = line.strip()
+        if stripped.startswith("- modules/classes/"):
+            continue # We will regenerate these
+        if stripped.startswith("- ./"): # Should not happen in 01_...
+             continue
+        if stripped.strip():
+             preserved_imports.append(line)
+             
+    # Collect all class files
+    class_imports = []
+    for root, dirs, files in os.walk(classes_dir):
+        if 'archive' in dirs:
+            dirs.remove('archive')
+        if 'deprecated' in dirs:
+            dirs.remove('deprecated')
+        
+        if 'archive' in root.split(os.sep): 
+             continue
+        if 'deprecated' in root.split(os.sep): 
+             continue
+             
+        for file in files:
+            if file.endswith(".yaml"):
+                # Path relative to 01_... location (schemas/20251121/linkml)
+                # classes_dir is schemas/20251121/linkml/modules/classes
+                # relative path: modules/classes/Filename
+                
+                # Check for duplicate base names? e.g. .yaml vs .yaml.bak?
+                # assume clean dir.
+                
+                rel_path = f"modules/classes/{file.replace('.yaml', '')}"
+                class_imports.append(f"  - {rel_path}\n")
+    
+    class_imports.sort()
+    
+    # Reassemble file
+    new_lines = lines[:start_idx + 1] + preserved_imports + class_imports + lines[end_idx:]
+    
+    with open(main_schema_path, 'w') as f:
+        f.writelines(new_lines)
+        
+    print(f"Updated {main_schema_path} with {len(class_imports)} class imports.")
+
+populate_imports("schemas/20251121/linkml/01_custodian_name_modular.yaml", "schemas/20251121/linkml/modules/classes")

remove_class_imports_from_slots.py

@@ -0,0 +1,46 @@
+import os
+
+def fix_file(path):
+    with open(path, 'r') as f:
+        lines = f.readlines()
+        
+    new_lines = []
+    in_imports = False
+    modified = False
+    
+    for line in lines:
+        stripped = line.strip()
+        if stripped == "imports:":
+            in_imports = True
+            new_lines.append(line)
+            continue
+            
+        if in_imports:
+            if not stripped.startswith("-"):
+                if stripped and not stripped.startswith("#"):
+                    in_imports = False
+                new_lines.append(line)
+            else:
+                import_path = stripped.lstrip("- ").strip()
+                # Check for import of class: - ../classes/ClassName
+                if import_path.startswith("../classes/"):
+                    print(f"Removing class import in {path}: {stripped}")
+                    modified = True
+                    # Comment it out instead of deleting? Or delete. Deleting is cleaner.
+                    continue
+                else:
+                    new_lines.append(line)
+        else:
+            new_lines.append(line)
+            
+    if modified:
+        with open(path, 'w') as f:
+            f.writelines(new_lines)
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+            if file.endswith(".yaml"):
+                fix_file(os.path.join(root, file))
+
+process_directory("schemas/20251121/linkml/modules/slots")

remove_duplicates.py

@@ -0,0 +1,78 @@
+import os
+
+def remove_duplicates_in_file(path):
+    with open(path, 'r') as f:
+        lines = f.readlines()
+    
+    new_lines = []
+    # Track keys at each indentation level to detect duplicates
+    # keys_at_indent: {indent: set(keys)}
+    # But we need to clear deeper levels when indent decreases.
+    
+    keys_at_indent = {} 
+    prev_indent = 0
+    
+    # We also need to skip lines belonging to the removed duplicate key (list items)
+    skip_mode = False
+    skip_indent = -1
+    
+    keys_to_check = ["broad_mappings", "close_mappings", "related_mappings", "exact_mappings"]
+
+    for i, line in enumerate(lines):
+        stripped = line.strip()
+        
+        # Determine indent
+        if not stripped:
+            new_lines.append(line)
+            continue
+            
+        indent = len(line) - len(line.lstrip())
+        
+        # If we are skipping a block (children of removed key)
+        if skip_mode:
+            if indent > skip_indent:
+                # Still inside the block of removed key
+                continue
+            else:
+                # Block ended
+                skip_mode = False
+                skip_indent = -1
+        
+        # Update indentation tracking
+        if indent > prev_indent:
+            pass
+        elif indent < prev_indent:
+            # Clear keys for deeper levels
+            levels = [k for k in keys_at_indent if k > indent]
+            for l in levels:
+                del keys_at_indent[l]
+        
+        if indent not in keys_at_indent:
+            keys_at_indent[indent] = set()
+            
+        # Check if line is a key
+        if ':' in stripped and not stripped.startswith('-') and not stripped.startswith('#'):
+            key = stripped.split(':')[0].strip()
+            
+            if key in keys_to_check:
+                if key in keys_at_indent[indent]:
+                    print(f"Removing duplicate key '{key}' in {path} at line {i+1}")
+                    skip_mode = True
+                    skip_indent = indent
+                    continue
+                else:
+                    keys_at_indent[indent].add(key)
+        
+        new_lines.append(line)
+        prev_indent = indent
+        
+    with open(path, 'w') as f:
+        f.writelines(new_lines)
+
+def process_directory(directory):
+    for root, dirs, files in os.walk(directory):
+        for file in files:
+            if file.endswith(".yaml"):
+                remove_duplicates_in_file(os.path.join(root, file))
+
+process_directory("schemas/20251121/linkml/modules/classes")

reorder_imports.py

@@ -0,0 +1,105 @@
+import os
+
+def reorder_imports(path):
+    with open(path, 'r') as f:
+        lines = f.readlines()
+        
+    # Find imports block
+    start_idx = -1
+    end_idx = -1
+    
+    for i, line in enumerate(lines):
+        if line.strip() == "imports:":
+            start_idx = i
+            break
+            
+    if start_idx == -1:
+        return
+
+    for i in range(start_idx + 1, len(lines)):
+        line = lines[i]
+        if line.strip() and not line.startswith(" ") and not line.startswith("#"):
+             end_idx = i
+             break
+    
+    if end_idx == -1:
+        end_idx = len(lines)
+        
+    imports = lines[start_idx + 1:end_idx]
+    
+    # Separate class imports
+    class_imports = []
+    other_imports = []
+    
+    for line in imports:
+        if "modules/classes/" in line:
+            class_imports.append(line)
+        else:
+            other_imports.append(line)
+            
+    # Define priority classes
+    priority_classes = [
+        "ReconstructedEntity",
+        "CustodianType",
+        "Activity",
+        "Event",
+        "Provenance",
+        "Identifier",
+        "Label",
+        "Description",
+        "Content",
+        "CollectionType",
+        "FindingAidType",
+        "DocumentType",
+        "StatementType",
+        "NameType",
+        "LabelType",
+        "Place",
+        "TimeSpan",
+        "Agent",
+        "Organization",
+        "Person",
+        "Group",
+        "Thing",
+        "Concept",
+        "InformationObject",
+        "DigitalPlatform",
+        "Storage",
+        "FinancialStatement",
+        "Budget",
+        "Plan",
+        "Action"
+    ]
+    
+    sorted_class_imports = []
+    remaining_class_imports = []
+    
+    # Extract priority
+    for p in priority_classes:
+        import_line = f"- modules/classes/{p}\n"
+        # Find matching line (ignoring whitespace)
+        found = False
+        # Iterate over copy to allow removal
+        for line in list(class_imports):
+            if p in line and line.strip().endswith(p): # Endswith classname
+                 sorted_class_imports.append(line)
+                 class_imports.remove(line)
+                 found = True
+                 break
+        if not found:
+            # Try to find without exact match
+             pass
+             
+    # Sort remaining
+    class_imports.sort()
+    
+    final_imports = other_imports + sorted_class_imports + class_imports
+    
+    new_lines = lines[:start_idx + 1] + final_imports + lines[end_idx:]
+    
+    with open(path, 'w') as f:
+        f.writelines(new_lines)
+        
+    print(f"Reordered imports in {path}")
+
+reorder_imports("schemas/20251121/linkml/01_custodian_name_modular.yaml")

schemas/20251121/linkml/manifest.json

@@ -1,5 +1,5 @@
 {
-  "generated": "2026-02-01T01:04:01.193Z",
+  "generated": "2026-02-01T18:55:42.704Z",
   "schemaRoot": "/schemas/20251121/linkml",
   "totalFiles": 2906,
   "categoryCounts": {

schemas/20251121/linkml/modules/classes/APIEndpoint.yaml

@@ -20,6 +20,6 @@ classes:
       specificity_rationale: Generic utility class/slot created during migration
       custodian_types: "['*']"
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_url
+  - ../slots/has_or_had_url

schemas/20251121/linkml/modules/classes/APIRequest.yaml

@@ -9,10 +9,10 @@ prefixes:
   rico: https://www.ica.org/standards/RiC/ontology#
   wd: http://www.wikidata.org/entity/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_endpoint
+  - ../slots/has_or_had_endpoint
-- ../slots/has_or_had_provenance
+  - ../slots/has_or_had_provenance
-- ../slots/has_or_had_version
+  - ../slots/has_or_had_version
 classes:
   APIRequest:
     class_uri: prov:Activity

schemas/20251121/linkml/modules/classes/APIVersion.yaml

@@ -9,9 +9,9 @@ prefixes:
   rico: https://www.ica.org/standards/RiC/ontology#
   wd: http://www.wikidata.org/entity/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_identifier
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
 classes:
   APIVersion:
     class_uri: schema:SoftwareApplication

schemas/20251121/linkml/modules/classes/AVEquipment.yaml

@@ -15,9 +15,9 @@ prefixes:
   xsd: http://www.w3.org/2001/XMLSchema#
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_name
+  - ../slots/has_or_had_name
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_type
 classes:
   AVEquipment:
     class_uri: schema:Product

schemas/20251121/linkml/modules/classes/AcademicArchive.yaml

@@ -8,28 +8,15 @@ prefixes:
   rico: https://www.ica.org/standards/RiC/ontology#
   wd: http://www.wikidata.org/entity/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_hypernym
+  - ../slots/has_or_had_hypernym
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_identifier
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
-- ../slots/has_or_had_scope
+  - ../slots/has_or_had_scope
-- ../slots/has_or_had_score
+  - ../slots/has_or_had_score
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_type
-- ../slots/hold_or_held_record_set_type
+  - ../slots/hold_or_held_record_set_type
-- ../slots/is_or_was_related_to
+  - ../slots/is_or_was_related_to
-- ../slots/specificity_annotation
-- ./AcademicArchiveRecordSetType
-- ./AcademicArchiveRecordSetTypes
-- ./ArchiveOrganizationType
-- ./CollectionType
-- ./DualClassLink
-- ./Scope
-- ./SpecificityAnnotation
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
-- ./WikiDataEntry
-- ./WikidataAlignment
 classes:
   AcademicArchive:
     is_a: ArchiveOrganizationType
@@ -40,7 +27,6 @@ classes:
     - hold_or_held_record_set_type
     - has_or_had_hypernym
     - has_or_had_label
-    - specificity_annotation
     - has_or_had_score
     - is_or_was_related_to
     structured_aliases:

schemas/20251121/linkml/modules/classes/AcademicArchiveRecordSetType.yaml

@@ -8,16 +8,11 @@ prefixes:
   rico: https://www.ica.org/standards/RiC/ontology#
   wd: http://www.wikidata.org/entity/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_scope
+  - ../slots/has_or_had_scope
-- ../slots/has_or_had_score
+  - ../slots/has_or_had_score
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_type
-- ../slots/is_or_was_related_to
+  - ../slots/is_or_was_related_to
-- ../slots/specificity_annotation
-- ./CollectionType
-- ./DualClassLink
-- ./Scope
-- ./WikidataAlignment
 classes:
   AcademicArchiveRecordSetType:
     description: A rico:RecordSetType for classifying collections of academic and
@@ -26,7 +21,6 @@ classes:
     class_uri: rico:RecordSetType
     slots:
     - has_or_had_type
-    - specificity_annotation
     - has_or_had_score
     - has_or_had_scope
     - is_or_was_related_to

schemas/20251121/linkml/modules/classes/AcademicArchiveRecordSetTypes.yaml

@@ -12,23 +12,17 @@ prefixes:
   bf: http://id.loc.gov/ontologies/bibframe/
 default_prefix: hc
 imports:
-- linkml:types
+  - ./AcademicArchiveRecordSetType
-- ../slots/has_or_had_score
+  - linkml:types
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_score
-- ../slots/organizational_principle
+  - ../slots/has_or_had_type
-- ../slots/organizational_principle_uri
+  - ../slots/organizational_principle
-- ../slots/privacy_note
+  - ../slots/organizational_principle_uri
-- ../slots/record_note
+  - ../slots/privacy_note
-- ../slots/record_set_type
+  - ../slots/record_note
-- ../slots/scope_exclude
+  - ../slots/record_set_type
-- ../slots/scope_include
+  - ../slots/scope_exclude
-- ../slots/specificity_annotation
+  - ../slots/scope_include
-- ./AcademicArchive
-- ./AcademicArchiveRecordSetType
-- ./SpecificityAnnotation
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
 classes:
   UniversityAdministrativeFonds:
     is_a: AcademicArchiveRecordSetType
@@ -67,11 +61,10 @@ classes:
     - accreditation records
     - executive correspondence
     - institutional bylaws
-    exact_mappings:
+    broad_mappings:
     - rico:RecordSetType
     related_mappings:
     - rico-rst:Fonds
-    broad_mappings:
     - wd:Q1643722
     - rico:RecordSetType
     - skos:Concept
@@ -83,7 +76,6 @@ classes:
     - rico-rst:Fonds
     slots:
     - has_or_had_type
-    - specificity_annotation
     - has_or_had_score
     - organizational_principle
     - organizational_principle_uri
@@ -151,11 +143,10 @@ classes:
     - disciplinary records
     - student organizations
     - financial aid records
-    exact_mappings:
+    broad_mappings:
     - rico:RecordSetType
     related_mappings:
     - rico-rst:Series
-    broad_mappings:
     - wd:Q185583
     - rico:RecordSetType
     - skos:Concept
@@ -168,7 +159,6 @@ classes:
     - UniversityAdministrativeFonds
     slots:
     - has_or_had_type
-    - specificity_annotation
     - has_or_had_score
     - organizational_principle
     - organizational_principle_uri
@@ -235,11 +225,10 @@ classes:
     - conference papers
     - professional papers
     - academic papers
-    exact_mappings:
+    broad_mappings:
     - rico:RecordSetType
     related_mappings:
     - rico-rst:Fonds
-    broad_mappings:
     - wd:Q22075301
     - rico:RecordSetType
     - skos:Concept
@@ -255,7 +244,6 @@ classes:
         restrictions  on access or publication specified by donor agreement.
     slots:
     - has_or_had_type
-    - specificity_annotation
     - has_or_had_score
     - organizational_principle
     - organizational_principle_uri
@@ -319,11 +307,10 @@ classes:
     - event documentation
     - building documentation
     - campus life
-    exact_mappings:
+    broad_mappings:
     - rico:RecordSetType
     related_mappings:
     - rico-rst:Collection
-    broad_mappings:
     - wd:Q9388534
     - rico:RecordSetType
     - skos:Concept
@@ -339,7 +326,6 @@ classes:
         by subject,  format, or documentation purpose rather than strict provenance.
     slots:
     - has_or_had_type
-    - specificity_annotation
     - has_or_had_score
     - organizational_principle
     - organizational_principle_uri

schemas/20251121/linkml/modules/classes/AcademicInstitution.yaml

@@ -8,8 +8,8 @@ prefixes:
   schema: http://schema.org/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_name
+  - ../slots/has_or_had_name
 classes:
   AcademicInstitution:
     class_uri: schema:EducationalOrganization

schemas/20251121/linkml/modules/classes/AcademicProgram.yaml

@@ -8,8 +8,8 @@ prefixes:
   schema: http://schema.org/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_name
+  - ../slots/has_or_had_name
 classes:
   AcademicProgram:
     class_uri: schema:EducationalOccupationalProgram

schemas/20251121/linkml/modules/classes/Access.yaml

@@ -9,16 +9,14 @@ prefixes:
   crm: http://www.cidoc-crm.org/cidoc-crm/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../enums/AccessTypeEnum
+  - ../enums/AccessTypeEnum
-- ../metadata
+  - ../metadata
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_frequency
+  - ../slots/has_or_had_frequency
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_type
-- ../slots/has_or_had_user_category
+  - ../slots/has_or_had_user_category
-- ../slots/temporal_extent
+  - ../slots/temporal_extent
-- ./Frequency
-- ./TimeSpan
 classes:
   Access:
     class_uri: dcterms:RightsStatement

schemas/20251121/linkml/modules/classes/AccessApplication.yaml

@@ -7,11 +7,10 @@ prefixes:
   hc: https://nde.nl/ontology/hc/
   schema: http://schema.org/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
-- ../slots/has_or_had_url
+  - ../slots/has_or_had_url
-- ./URL
 default_prefix: hc
 classes:
   AccessApplication:

schemas/20251121/linkml/modules/classes/AccessControl.yaml

@@ -8,8 +8,8 @@ prefixes:
   schema: http://schema.org/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
 classes:
   AccessControl:
     class_uri: schema:DigitalDocumentPermission

schemas/20251121/linkml/modules/classes/AccessInterface.yaml

@@ -7,11 +7,10 @@ prefixes:
   hc: https://nde.nl/ontology/hc/
   dcat: http://www.w3.org/ns/dcat#
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
-- ../slots/has_or_had_url
+  - ../slots/has_or_had_url
-- ./URL
 default_prefix: hc
 classes:
   AccessInterface:

schemas/20251121/linkml/modules/classes/AccessLevel.yaml

@@ -8,8 +8,8 @@ prefixes:
   skos: http://www.w3.org/2004/02/skos/core#
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
 classes:
   AccessLevel:
     class_uri: skos:Concept

schemas/20251121/linkml/modules/classes/AccessPolicy.yaml

@@ -12,37 +12,26 @@ prefixes:
   wd: http://www.wikidata.org/entity/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/credentials_required
+  - ../slots/credentials_required
-- ../slots/cultural_protocol_url
+  - ../slots/cultural_protocol_url
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_embargo_end_date
+  - ../slots/has_or_had_embargo_end_date
-- ../slots/has_or_had_embargo_reason
+  - ../slots/has_or_had_embargo_reason
-- ../slots/has_or_had_level
+  - ../slots/has_or_had_level
-- ../slots/has_or_had_score
+  - ../slots/has_or_had_score
-- ../slots/imposes_or_imposed
+  - ../slots/imposes_or_imposed
-- ../slots/legal_basis
+  - ../slots/legal_basis
-- ../slots/policy_id
+  - ../slots/policy_id
-- ../slots/policy_name
+  - ../slots/policy_name
-- ../slots/poses_or_posed_condition
+  - ../slots/poses_or_posed_condition
-- ../slots/registration_required
+  - ../slots/registration_required
-- ../slots/requires_appointment
+  - ../slots/requires_appointment
-- ../slots/requires_or_required
+  - ../slots/requires_or_required
-- ../slots/review_date
+  - ../slots/review_date
-- ../slots/rights_statement
+  - ../slots/rights_statement
-- ../slots/rights_statement_url
+  - ../slots/rights_statement_url
-- ../slots/specificity_annotation
+  - ../slots/temporal_extent
-- ../slots/temporal_extent
-- ./AccessLevel
-- ./Appointment
-- ./Condition
-- ./Description
-- ./Fee
-- ./SpecificityAnnotation
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
-- ./TimeSpan
 classes:
   AccessPolicy:
     class_uri: premis:RightsStatus
@@ -53,8 +42,8 @@ classes:
       \ for preservation, not current access\n- Access restricted until triggering conditions (time, event)\n- \"Gray literature\" or un-catalogued backlogs awaiting processing\n"
     exact_mappings:
     - premis:RightsStatus
-    - dcterms:accessRights
     close_mappings:
+    - dcterms:accessRights
     - rico:Rule
     - schema:ActionAccessSpecification
     related_mappings:
@@ -77,7 +66,6 @@ classes:
     - review_date
     - rights_statement
     - rights_statement_url
-    - specificity_annotation
     - has_or_had_score
     - temporal_extent
     slot_usage:

schemas/20251121/linkml/modules/classes/AccessTriggerEvent.yaml

@@ -9,9 +9,9 @@ prefixes:
   schema: http://schema.org/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/temporal_extent
+  - ../slots/temporal_extent
 classes:
   AccessTriggerEvent:
     class_uri: prov:Activity

schemas/20251121/linkml/modules/classes/AccessibilityFeature.yaml

@@ -12,9 +12,9 @@ prefixes:
 default_prefix: hc
 
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
 classes:
   AccessibilityFeature:
     class_uri: schema:LocationFeatureSpecification

schemas/20251121/linkml/modules/classes/AccessionEvent.yaml

@@ -8,13 +8,11 @@ prefixes:
   rico: https://www.ica.org/standards/RiC/ontology#
   skos: http://www.w3.org/2004/02/skos/core#
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_identifier
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
-- ../slots/temporal_extent
+  - ../slots/temporal_extent
-- ./Identifier
-- ./TimeSpan
 default_prefix: hc
 classes:
   AccessionEvent:

schemas/20251121/linkml/modules/classes/AccessionNumber.yaml

@@ -9,10 +9,9 @@ prefixes:
   crm: http://www.cidoc-crm.org/cidoc-crm/
   skos: http://www.w3.org/2004/02/skos/core#
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
-- ./Identifier
 default_prefix: hc
 classes:
   AccessionNumber:

schemas/20251121/linkml/modules/classes/AccountIdentifier.yaml

@@ -12,8 +12,8 @@ prefixes:
 default_prefix: hc
 
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_value
+  - ../slots/has_or_had_value
 classes:
   AccountIdentifier:
     class_uri: schema:PropertyValue

schemas/20251121/linkml/modules/classes/AccountStatus.yaml

@@ -12,8 +12,8 @@ prefixes:
 default_prefix: hc
 
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
 classes:
   AccountStatus:
     class_uri: skos:Concept

schemas/20251121/linkml/modules/classes/Accreditation.yaml

@@ -12,8 +12,8 @@ prefixes:
 default_prefix: hc
 
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
 classes:
   Accreditation:
     class_uri: schema:Permit

schemas/20251121/linkml/modules/classes/AccreditationBody.yaml

@@ -12,8 +12,8 @@ prefixes:
 default_prefix: hc
 
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_name
+  - ../slots/has_or_had_name
 classes:
   AccreditationBody:
     class_uri: schema:Organization

schemas/20251121/linkml/modules/classes/AccreditationEvent.yaml

@@ -12,8 +12,8 @@ prefixes:
 default_prefix: hc
 
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/temporal_extent
+  - ../slots/temporal_extent
 classes:
   AccreditationEvent:
     class_uri: prov:Activity

schemas/20251121/linkml/modules/classes/Accumulation.yaml

@@ -9,9 +9,9 @@ prefixes:
   rico: https://www.ica.org/standards/RiC/ontology#
   wd: http://www.wikidata.org/entity/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/temporal_extent
+  - ../slots/temporal_extent
 classes:
   Accumulation:
     class_uri: rico:AccumulationRelation

schemas/20251121/linkml/modules/classes/AccuracyLevel.yaml

@@ -9,10 +9,10 @@ prefixes:
   rico: https://www.ica.org/standards/RiC/ontology#
   wd: http://www.wikidata.org/entity/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
-- ../slots/has_or_had_value
+  - ../slots/has_or_had_value
 classes:
   AccuracyLevel:
     class_uri: skos:Concept

schemas/20251121/linkml/modules/classes/Acquisition.yaml

@@ -15,15 +15,9 @@ prefixes:
   org: http://www.w3.org/ns/org#
   xsd: http://www.w3.org/2001/XMLSchema#
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_score
+  - ../slots/has_or_had_score
-- ../slots/specificity_annotation
+  - ../slots/temporal_extent
-- ../slots/temporal_extent
-- ./SpecificityAnnotation
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
-- ./TimeSpan
 default_range: string
 enums:
   AcquisitionMethodEnum:
@@ -89,7 +83,6 @@ classes:
     - dwc:Event
     slots:
     - temporal_extent
-    - specificity_annotation
     - has_or_had_score
     comments:
     - Created per slot_fixes.yaml revision for collection_date migration

schemas/20251121/linkml/modules/classes/AcquisitionBudget.yaml

@@ -1,21 +0,0 @@
-id: https://nde.nl/ontology/hc/class/AcquisitionBudget
-name: AcquisitionBudget
-title: AcquisitionBudget
-description: >-
-  Budget allocated for acquisitions.
-prefixes:
-  linkml: https://w3id.org/linkml/
-  hc: https://nde.nl/ontology/hc/
-  schema: http://schema.org/
-default_prefix: hc
-imports:
-- linkml:types
-classes:
-  AcquisitionBudget:
-    class_uri: schema:MonetaryAmount
-    description: Acquisition budget.
-    annotations:
-      specificity_score: 0.1
-      specificity_rationale: "Generic utility class created during migration"
-      custodian_types: '["*"]'
-    slots:

schemas/20251121/linkml/modules/classes/AcquisitionEvent.yaml

@@ -8,15 +8,11 @@ prefixes:
   rico: https://www.ica.org/standards/RiC/ontology#
   skos: http://www.w3.org/2004/02/skos/core#
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_method
+  - ../slots/has_or_had_method
-- ../slots/has_or_had_origin
+  - ../slots/has_or_had_origin
-- ../slots/has_or_had_provenance
+  - ../slots/has_or_had_provenance
-- ../slots/temporal_extent
+  - ../slots/temporal_extent
-- ./AcquisitionMethod
-- ./Entity
-- ./Provenance
-- ./TimeSpan
 default_prefix: hc
 classes:
   AcquisitionEvent:

schemas/20251121/linkml/modules/classes/AcquisitionMethod.yaml

@@ -14,9 +14,9 @@ prefixes:
   org: http://www.w3.org/ns/org#
   xsd: http://www.w3.org/2001/XMLSchema#
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
 default_prefix: hc
 classes:
   AcquisitionMethod:

schemas/20251121/linkml/modules/classes/Activity.yaml

@@ -13,29 +13,17 @@ prefixes:
   skos: http://www.w3.org/2004/02/skos/core#
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../metadata
+  - ../metadata
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_identifier
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
-- ../slots/has_or_had_score
+  - ../slots/has_or_had_score
-- ../slots/has_or_had_status
+  - ../slots/has_or_had_status
-- ../slots/is_or_was_succeeded_by
+  - ../slots/is_or_was_succeeded_by
-- ../slots/note
+  - ../slots/note
-- ../slots/preceding_activity
+  - ../slots/preceding_activity
-- ../slots/specificity_annotation
+  - ../slots/temporal_extent
-- ../slots/temporal_extent
-- ./ActivityType
-- ./ActivityTypes
-- ./Description
-- ./Identifier
-- ./Label
-- ./SpecificityAnnotation
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
-- ./TimeSpan
-- ./Activity
 classes:
   Activity:
     class_uri: prov:Activity
@@ -58,7 +46,6 @@ classes:
     - preceding_activity
     - has_or_had_status
     - note
-    - specificity_annotation
     - has_or_had_score
     slot_usage:
       has_or_had_identifier:

schemas/20251121/linkml/modules/classes/ActivityType.yaml

@@ -12,19 +12,13 @@ prefixes:
   wd: http://www.wikidata.org/entity/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/created
+  - ../slots/created
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_identifier
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
-- ../slots/has_or_had_score
+  - ../slots/has_or_had_score
-- ../slots/modified
+  - ../slots/modified
-- ../slots/specificity_annotation
-- ./SpecificityAnnotation
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
-- ./WikiDataIdentifier
 classes:
   ActivityType:
     class_uri: skos:Concept
@@ -43,7 +37,6 @@ classes:
     slots:
     - created
     - modified
-    - specificity_annotation
     - has_or_had_score
     - has_or_had_description
     - has_or_had_identifier

schemas/20251121/linkml/modules/classes/ActivityTypes.yaml

@@ -7,8 +7,8 @@ prefixes:
   hc: https://nde.nl/ontology/hc/
 default_prefix: hc
 imports:
-- linkml:types
+  - ./ActivityType
-- ./ActivityType
+  - linkml:types
 classes:
   ActivityTypes:
     class_uri: hc:ActivityTypes

schemas/20251121/linkml/modules/classes/Actor.yaml

@@ -8,9 +8,9 @@ prefixes:
   prov: http://www.w3.org/ns/prov#
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_name
+  - ../slots/has_or_had_name
-- ../slots/has_or_had_role
+  - ../slots/has_or_had_role
 classes:
   Actor:
     class_uri: prov:Agent

schemas/20251121/linkml/modules/classes/Address.yaml

@@ -12,28 +12,19 @@ prefixes:
   dcterms: http://purl.org/dc/terms/
   skos: http://www.w3.org/2004/02/skos/core#
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/country_name
+  - ../slots/country_name
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
-- ../slots/has_or_had_section
+  - ../slots/has_or_had_section
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_type
-- ../slots/is_or_was_derived_from  # was: was_derived_from
+  - ../slots/is_or_was_derived_from  # was: was_derived_from
-- ../slots/is_or_was_generated_by  # was: was_generated_by
+  - ../slots/is_or_was_generated_by  # was: was_generated_by
-- ../slots/is_or_was_located_in
+  - ../slots/is_or_was_located_in
-- ../slots/latitude
+  - ../slots/latitude
-- ../slots/locality
+  - ../slots/locality
-- ../slots/longitude
+  - ../slots/longitude
-- ../slots/postal_code
+  - ../slots/postal_code
-- ../slots/region
+  - ../slots/region
-- ./AddressType
-- ./City  # Added for is_or_was_located_in range (2026-01-18, Rule 53)
-- ./Country
-- ./CustodianObservation
-- ./ReconstructionActivity
-- ./Settlement
-- ./Subregion
-- ./HouseNumber
-- ./Label
 default_range: string
 classes:
   Address:

schemas/20251121/linkml/modules/classes/AddressComponent.yaml

@@ -8,12 +8,10 @@ prefixes:
   vcard: http://www.w3.org/2006/vcard/ns#
   locn: http://www.w3.org/ns/locn#
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_type
-- ../slots/long_name
+  - ../slots/long_name
-- ../slots/short_name
+  - ../slots/short_name
-- ./ComponentType
-- ./ComponentTypes
 default_range: string
 classes:
   AddressComponent:

schemas/20251121/linkml/modules/classes/AddressType.yaml

@@ -12,17 +12,15 @@ prefixes:
   crm: http://www.cidoc-crm.org/cidoc-crm/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_code
+  - ../slots/has_or_had_code
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_hypernym
+  - ../slots/has_or_had_hypernym
-- ../slots/has_or_had_hyponym
+  - ../slots/has_or_had_hyponym
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_identifier
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
-- ../slots/is_or_was_equivalent_to
+  - ../slots/is_or_was_equivalent_to
-- ../slots/is_or_was_related_to
+  - ../slots/is_or_was_related_to
-- ./WikiDataIdentifier
-- ./AddressType
 classes:
   AddressType:
     class_uri: skos:Concept

schemas/20251121/linkml/modules/classes/AddressTypes.yaml

@@ -9,8 +9,8 @@ prefixes:
   skos: http://www.w3.org/2004/02/skos/core#
 default_prefix: hc
 imports:
-- linkml:types
+  - ./AddressType
-- ./AddressType
+  - linkml:types
 classes:
   HeadquartersAddress:
     is_a: AddressType

schemas/20251121/linkml/modules/classes/Administration.yaml

@@ -9,10 +9,10 @@ prefixes:
   rico: https://www.ica.org/standards/RiC/ontology#
   wd: http://www.wikidata.org/entity/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_identifier
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
 classes:
   Administration:
     class_uri: org:OrganizationalUnit

schemas/20251121/linkml/modules/classes/AdministrativeLevel.yaml

@@ -14,10 +14,10 @@ prefixes:
   xsd: http://www.w3.org/2001/XMLSchema#
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_code
+  - ../slots/has_or_had_code
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
 classes:
   AdministrativeLevel:
     class_uri: skos:Concept

schemas/20251121/linkml/modules/classes/AdministrativeOffice.yaml

@@ -2,33 +2,17 @@ id: https://nde.nl/ontology/hc/class/administrative-office
 name: administrative_office_class
 title: AdministrativeOffice Class
 imports:
-- linkml:types
+  - linkml:types
-- ../classes/Description
+  - ../slots/has_or_had_description
-- ../classes/Identifier
+  - ../slots/has_or_had_function
-- ../classes/Label
+  - ../slots/has_or_had_identifier
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_label
-- ../slots/has_or_had_function
+  - ../slots/has_or_had_score
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_staff
-- ../slots/has_or_had_label
+  - ../slots/is_leased
-- ../slots/has_or_had_score
+  - ../slots/is_or_was_derived_from
-- ../slots/has_or_had_staff
+  - ../slots/is_or_was_generated_by
-- ../slots/is_leased
+  - ../slots/lease_expiry
-- ../slots/is_or_was_derived_from
-- ../slots/is_or_was_generated_by
-- ../slots/lease_expiry
-- ../slots/specificity_annotation
-- ./CustodianObservation
-- ./FunctionType
-- ./ReconstructedEntity
-- ./ReconstructionActivity
-- ./SpecificityAnnotation
-- ./Staff
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
-- ./Description
-- ./Identifier
-- ./Label
 prefixes:
   linkml: https://w3id.org/linkml/
   hc: https://nde.nl/ontology/hc/
@@ -63,7 +47,6 @@ classes:
     - has_or_had_function
     - is_leased
     - lease_expiry
-    - specificity_annotation
     - has_or_had_score
     - is_or_was_derived_from
     - is_or_was_generated_by

schemas/20251121/linkml/modules/classes/AdministrativeUnit.yaml

@@ -12,8 +12,8 @@ prefixes:
 default_prefix: hc
 
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_name
+  - ../slots/has_or_had_name
 classes:
   AdministrativeUnit:
     class_uri: org:OrganizationalUnit

schemas/20251121/linkml/modules/classes/AdmissionFee.yaml

@@ -9,7 +9,7 @@ prefixes:
   schema: http://schema.org/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
 classes:
   AdmissionFee:
     class_uri: schema:PriceSpecification

schemas/20251121/linkml/modules/classes/AdmissionInfo.yaml

@@ -8,7 +8,7 @@ prefixes:
   prov: http://www.w3.org/ns/prov#
   xsd: http://www.w3.org/2001/XMLSchema#
 imports:
-- linkml:types
+  - linkml:types
 default_range: string
 classes:
   AdmissionInfo:

schemas/20251121/linkml/modules/classes/AdvertisingRadioArchive.yaml

@@ -4,30 +4,18 @@ title: Advertising Radio Archive Type
 prefixes:
   linkml: https://w3id.org/linkml/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_identifier
-- ../slots/has_or_had_score
+  - ../slots/has_or_had_score
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_type
-- ../slots/hold_or_held_record_set_type
+  - ../slots/hold_or_held_record_set_type
-- ../slots/is_or_was_related_to
+  - ../slots/is_or_was_related_to
-- ../slots/specificity_annotation
-- ./AdvertisingRadioArchiveRecordSetType
-- ./AdvertisingRadioArchiveRecordSetTypes
-- ./ArchiveOrganizationType
-- ./CollectionType
-- ./SpecificityAnnotation
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
-- ./WikiDataEntry
-- ./WikidataAlignment
 classes:
   AdvertisingRadioArchive:
     is_a: ArchiveOrganizationType
     class_uri: skos:Concept
     slots:
     - hold_or_held_record_set_type
-    - specificity_annotation
     - has_or_had_score
     description: 'Sound archive specializing in advertising radio productions and commercials.
 

schemas/20251121/linkml/modules/classes/AdvertisingRadioArchiveRecordSetType.yaml

@@ -5,13 +5,10 @@ prefixes:
   linkml: https://w3id.org/linkml/
   wd: http://www.wikidata.org/entity/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_score
+  - ../slots/has_or_had_score
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_type
-- ../slots/is_or_was_related_to
+  - ../slots/is_or_was_related_to
-- ../slots/specificity_annotation
-- ./CollectionType
-- ./WikidataAlignment
 classes:
   AdvertisingRadioArchiveRecordSetType:
     description: A rico:RecordSetType for classifying collections of advertising radio  productions and commercials within heritage institutions.
@@ -29,7 +26,6 @@ classes:
     - AdvertisingRadioArchive
     slots:
     - has_or_had_type
-    - specificity_annotation
     - has_or_had_score
     - is_or_was_related_to
     annotations:

schemas/20251121/linkml/modules/classes/AdvertisingRadioArchiveRecordSetTypes.yaml

@@ -11,21 +11,15 @@ prefixes:
   wd: http://www.wikidata.org/entity/
 default_prefix: hc
 imports:
-- linkml:types
+  - ./AdvertisingRadioArchiveRecordSetType
-- ../slots/has_or_had_score
+  - linkml:types
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_score
-- ../slots/organizational_principle
+  - ../slots/has_or_had_type
-- ../slots/organizational_principle_uri
+  - ../slots/organizational_principle
-- ../slots/record_holder
+  - ../slots/organizational_principle_uri
-- ../slots/record_holder_note
+  - ../slots/record_holder
-- ../slots/record_set_type
+  - ../slots/record_holder_note
-- ../slots/specificity_annotation
+  - ../slots/record_set_type
-- ./AdvertisingRadioArchive
-- ./AdvertisingRadioArchiveRecordSetType
-- ./SpecificityAnnotation
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
 classes:
   RadioAdvertisementCollection:
     is_a: AdvertisingRadioArchiveRecordSetType
@@ -33,7 +27,7 @@ classes:
     description: "A rico:RecordSetType for Radio commercial recordings.\n\n**RiC-O\
       \ Alignment**:\nThis class is a specialized rico:RecordSetType following the\
       \ collection \norganizational principle as defined by rico-rst:Collection.\n"
-    exact_mappings:
+    broad_mappings:
     - rico:RecordSetType
     related_mappings:
     - rico-rst:Collection
@@ -44,7 +38,6 @@ classes:
     - rico:RecordSetType
     slots:
     - has_or_had_type
-    - specificity_annotation
     - has_or_had_score
     - organizational_principle
     - organizational_principle_uri
@@ -69,16 +62,13 @@ classes:
       specificity_score: 0.1
       specificity_rationale: Generic utility class/slot created during migration
       custodian_types: '[''*'']'
-    broad_mappings:
-    - rico:RecordSetType
-    - skos:Concept
   CampaignDocumentationSeries:
     is_a: AdvertisingRadioArchiveRecordSetType
     class_uri: rico:RecordSetType
     description: "A rico:RecordSetType for Advertising campaign records.\n\n**RiC-O\
       \ Alignment**:\nThis class is a specialized rico:RecordSetType following the\
       \ series \norganizational principle as defined by rico-rst:Series.\n"
-    exact_mappings:
+    broad_mappings:
     - rico:RecordSetType
     related_mappings:
     - rico-rst:Series
@@ -89,7 +79,6 @@ classes:
     - rico:RecordSetType
     slots:
     - has_or_had_type
-    - specificity_annotation
     - has_or_had_score
     - organizational_principle
     - organizational_principle_uri
@@ -110,6 +99,3 @@ classes:
       record_holder_note:
         equals_string: This RecordSetType is typically held by AdvertisingRadioArchive
           custodians. Inverse of rico:isOrWasHolderOf.
-    broad_mappings:
-    - rico:RecordSetType
-    - skos:Concept

schemas/20251121/linkml/modules/classes/Age.yaml

@@ -8,10 +8,10 @@ prefixes:
   dcterms: http://purl.org/dc/terms/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_quantity
+  - ../slots/has_or_had_quantity
-- ../slots/has_or_had_unit
+  - ../slots/has_or_had_unit
 classes:
   Age:
     class_uri: schema:QuantitativeValue

schemas/20251121/linkml/modules/classes/Agenda.yaml

@@ -8,9 +8,9 @@ prefixes:
   schema: http://schema.org/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
 classes:
   Agenda:
     class_uri: schema:Action

schemas/20251121/linkml/modules/classes/Agent.yaml

@@ -10,10 +10,10 @@ prefixes:
   dcterms: http://purl.org/dc/terms/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_identifier
-- ../slots/has_or_had_name
+  - ../slots/has_or_had_name
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_type
 classes:
   Agent:
     class_uri: prov:Agent

schemas/20251121/linkml/modules/classes/AgentType.yaml

@@ -7,10 +7,10 @@ prefixes:
   skos: http://www.w3.org/2004/02/skos/core#
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_code
+  - ../slots/has_or_had_code
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
 classes:
   AgentType:
     class_uri: skos:Concept

schemas/20251121/linkml/modules/classes/AgentTypes.yaml

@@ -7,8 +7,8 @@ description: 'Concrete subclasses for AgentType taxonomy.
 
   '
 imports:
-- linkml:types
+  - ./AgentType
-- ./AgentType
+  - linkml:types
 prefixes:
   linkml: https://w3id.org/linkml/
   hc: https://nde.nl/ontology/hc/

schemas/20251121/linkml/modules/classes/Agreement.yaml

@@ -14,12 +14,11 @@ prefixes:
   xsd: http://www.w3.org/2001/XMLSchema#
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
-- ../slots/is_or_was_signed_on
+  - ../slots/is_or_was_signed_on
-- ../slots/temporal_extent
+  - ../slots/temporal_extent
-- ./TimeSpan
 classes:
   Agreement:
     class_uri: schema:Contract

schemas/20251121/linkml/modules/classes/AirChanges.yaml

@@ -7,11 +7,9 @@ prefixes:
   schema: http://schema.org/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_quantity
+  - ../slots/has_or_had_quantity
-- ../slots/has_or_had_unit
+  - ../slots/has_or_had_unit
-- ./Quantity
-- ./Unit
 classes:
   AirChanges:
     class_uri: schema:QuantitativeValue

schemas/20251121/linkml/modules/classes/Alignment.yaml

@@ -8,10 +8,10 @@ description: 'Represents positioning or alignment information for content elemen
   - Visual element placement in layouts
   '
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_alignment
+  - ../slots/has_or_had_alignment
-- ../slots/has_or_had_unit
+  - ../slots/has_or_had_unit
-- ../slots/has_or_had_value
+  - ../slots/has_or_had_value
 prefixes:
   linkml: https://w3id.org/linkml/
   hc: https://nde.nl/ontology/hc/

schemas/20251121/linkml/modules/classes/AllocationAgency.yaml

@@ -8,20 +8,11 @@ prefixes:
   gleif_base: https://www.gleif.org/ontology/Base/
   hc: https://nde.nl/ontology/hc/
 imports:
-- linkml:types
+  - linkml:types
-- ../enums/AllocationDomainEnum
+  - ../enums/AllocationDomainEnum
-- ../metadata
+  - ../metadata
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_score
+  - ../slots/has_or_had_score
-- ../slots/specificity_annotation
-- ./Country
-- ./RegistrationAuthority
-- ./SpecificityAnnotation
-- ./Standard
-- ./Subregion
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
 classes:
   AllocationAgency:
     class_uri: org:FormalOrganization
@@ -55,7 +46,6 @@ classes:
     - gleif_base:RegistrationAuthority
     - schema:Organization
     slots:
-    - specificity_annotation
     - has_or_had_score
     - name
     - name_local

schemas/20251121/linkml/modules/classes/AllocationEvent.yaml

@@ -8,9 +8,8 @@ prefixes:
   prov: http://www.w3.org/ns/prov#
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/temporal_extent
+  - ../slots/temporal_extent
-- ./TimeSpan
 classes:
   AllocationEvent:
     class_uri: prov:Activity

schemas/20251121/linkml/modules/classes/Alpha2Code.yaml

@@ -8,8 +8,8 @@ prefixes:
   schema: http://schema.org/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_code
+  - ../slots/has_or_had_code
 classes:
   Alpha2Code:
     class_uri: skos:Concept

schemas/20251121/linkml/modules/classes/Alpha3Code.yaml

@@ -8,8 +8,8 @@ prefixes:
   schema: http://schema.org/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_code
+  - ../slots/has_or_had_code
 classes:
   Alpha3Code:
     class_uri: skos:Concept

schemas/20251121/linkml/modules/classes/AlternativeName.yaml

@@ -1,36 +0,0 @@
-id: https://nde.nl/ontology/hc/classes/AlternativeName
-name: AlternativeName
-title: AlternativeName
-prefixes:
-  linkml: https://w3id.org/linkml/
-  hc: https://nde.nl/ontology/hc/
-  schema: http://schema.org/
-  prov: http://www.w3.org/ns/prov#
-  xsd: http://www.w3.org/2001/XMLSchema#
-  skos: http://www.w3.org/2004/02/skos/core#
-imports:
-- linkml:types
-default_range: string
-classes:
-  AlternativeName:
-    description: "Alternative name with language and source information, representing\
-      \ a variant or translated form of an institution's name.\nOntology mapping rationale:\
-      \ - class_uri is skos:altLabel because this represents an alternative\n  lexical\
-      \ label for a concept (the institution)\n- exact_mappings includes schema:alternateName\
-      \ as both represent variant names - related_mappings includes rdfs:label for\
-      \ general labeling context"
-    class_uri: skos:altLabel
-    exact_mappings:
-    - skos:altLabel
-    close_mappings:
-    - schema:alternateName
-    related_mappings:
-    - rdfs:label
-    annotations:
-      specificity_score: 0.1
-      specificity_rationale: Generic utility class/slot created during migration
-      custodian_types: '[''*'']'
-    slots:
-    - name
-    - language
-    - source

schemas/20251121/linkml/modules/classes/Altitude.yaml

@@ -9,9 +9,9 @@ prefixes:
   rico: https://www.ica.org/standards/RiC/ontology#
   wd: http://www.wikidata.org/entity/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_unit
+  - ../slots/has_or_had_unit
-- ../slots/has_or_had_value
+  - ../slots/has_or_had_value
 classes:
   Altitude:
     class_uri: schema:QuantitativeValue

schemas/20251121/linkml/modules/classes/AmendmentEvent.yaml

@@ -9,10 +9,10 @@ prefixes:
   rico: https://www.ica.org/standards/RiC/ontology#
   wd: http://www.wikidata.org/entity/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_identifier
-- ../slots/temporal_extent
+  - ../slots/temporal_extent
 classes:
   AmendmentEvent:
     class_uri: prov:Activity

schemas/20251121/linkml/modules/classes/Animal.yaml

@@ -15,11 +15,10 @@ prefixes:
   xsd: http://www.w3.org/2001/XMLSchema#
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
-- ../slots/is_or_was_categorized_as
+  - ../slots/is_or_was_categorized_as
-- ./Species
 classes:
   Animal:
     class_uri: schema:Animal

schemas/20251121/linkml/modules/classes/AnimalSoundArchive.yaml

@@ -4,30 +4,18 @@ title: Animal Sound Archive Type
 prefixes:
   linkml: https://w3id.org/linkml/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_identifier
-- ../slots/has_or_had_score
+  - ../slots/has_or_had_score
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_type
-- ../slots/hold_or_held_record_set_type
+  - ../slots/hold_or_held_record_set_type
-- ../slots/is_or_was_related_to
+  - ../slots/is_or_was_related_to
-- ../slots/specificity_annotation
-- ./AnimalSoundArchiveRecordSetType
-- ./AnimalSoundArchiveRecordSetTypes
-- ./ArchiveOrganizationType
-- ./CollectionType
-- ./SpecificityAnnotation
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
-- ./WikiDataEntry
-- ./WikidataAlignment
 classes:
   AnimalSoundArchive:
     is_a: ArchiveOrganizationType
     class_uri: skos:Concept
     slots:
     - hold_or_held_record_set_type
-    - specificity_annotation
     - has_or_had_score
     description: "Archive specializing in animal sound recordings for research and preservation.\n\n**Wikidata**: Q18574935\n\n**Scope**:\nAnimal sound archives (Tierstimmenarchive) preserve:\n- Bioacoustic recordings of wildlife\n- Species identification recordings\n- Environmental soundscapes with animal vocalizations\n- Scientific research recordings\n- Educational materials for species identification\n\n**Scientific Context**:\nThese archives support:\n- Biodiversity monitoring and conservation\n- Species identification and taxonomy\n- Behavioral ecology research\n- Environmental impact assessment\n- Educational outreach\n\n**Related Types**:\n- SoundArchive (Q2230431) - Broader audio collection type\n- ScientificArchive (Q27032095) - Research-focused archives\n\n**Notable Examples**:\n- Tierstimmenarchiv (Museum f\xFCr Naturkunde Berlin)\n- Macaulay Library (Cornell Lab of Ornithology)\n- British Library Sound Archive wildlife collection\n"
     slot_usage:

schemas/20251121/linkml/modules/classes/AnimalSoundArchiveRecordSetType.yaml

@@ -5,13 +5,10 @@ prefixes:
   linkml: https://w3id.org/linkml/
   wd: http://www.wikidata.org/entity/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_score
+  - ../slots/has_or_had_score
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_type
-- ../slots/is_or_was_related_to
+  - ../slots/is_or_was_related_to
-- ../slots/specificity_annotation
-- ./CollectionType
-- ./WikidataAlignment
 classes:
   AnimalSoundArchiveRecordSetType:
     description: A rico:RecordSetType for classifying collections of animal sound archive materials within heritage institutions.
@@ -29,7 +26,6 @@ classes:
     - AnimalSoundArchive
     slots:
     - has_or_had_type
-    - specificity_annotation
     - has_or_had_score
     - is_or_was_related_to
     annotations:

schemas/20251121/linkml/modules/classes/AnimalSoundArchiveRecordSetTypes.yaml

@@ -11,21 +11,15 @@ prefixes:
   wd: http://www.wikidata.org/entity/
 default_prefix: hc
 imports:
-- linkml:types
+  - ./AnimalSoundArchiveRecordSetType
-- ../slots/has_or_had_score
+  - linkml:types
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_score
-- ../slots/organizational_principle
+  - ../slots/has_or_had_type
-- ../slots/organizational_principle_uri
+  - ../slots/organizational_principle
-- ../slots/record_holder
+  - ../slots/organizational_principle_uri
-- ../slots/record_holder_note
+  - ../slots/record_holder
-- ../slots/record_set_type
+  - ../slots/record_holder_note
-- ../slots/specificity_annotation
+  - ../slots/record_set_type
-- ./AnimalSoundArchive
-- ./AnimalSoundArchiveRecordSetType
-- ./SpecificityAnnotation
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
 classes:
   BioacousticRecordingCollection:
     is_a: AnimalSoundArchiveRecordSetType
@@ -33,7 +27,7 @@ classes:
     description: "A rico:RecordSetType for Animal and nature sound recordings.\n\n\
       **RiC-O Alignment**:\nThis class is a specialized rico:RecordSetType following\
       \ the collection \norganizational principle as defined by rico-rst:Collection.\n"
-    exact_mappings:
+    broad_mappings:
     - rico:RecordSetType
     related_mappings:
     - rico-rst:Collection
@@ -44,7 +38,6 @@ classes:
     - rico:RecordSetType
     slots:
     - has_or_had_type
-    - specificity_annotation
     - has_or_had_score
     - organizational_principle
     - organizational_principle_uri
@@ -69,16 +62,13 @@ classes:
       specificity_score: 0.1
       specificity_rationale: Generic utility class/slot created during migration
       custodian_types: '[''*'']'
-    broad_mappings:
-    - rico:RecordSetType
-    - skos:Concept
   FieldRecordingSeries:
     is_a: AnimalSoundArchiveRecordSetType
     class_uri: rico:RecordSetType
     description: "A rico:RecordSetType for Field research audio.\n\n**RiC-O Alignment**:\n\
       This class is a specialized rico:RecordSetType following the series \norganizational\
       \ principle as defined by rico-rst:Series.\n"
-    exact_mappings:
+    broad_mappings:
     - rico:RecordSetType
     related_mappings:
     - rico-rst:Series
@@ -89,7 +79,6 @@ classes:
     - rico:RecordSetType
     slots:
     - has_or_had_type
-    - specificity_annotation
     - has_or_had_score
     - organizational_principle
     - organizational_principle_uri
@@ -110,6 +99,3 @@ classes:
       record_holder_note:
         equals_string: This RecordSetType is typically held by AnimalSoundArchive
           custodians. Inverse of rico:isOrWasHolderOf.
-    broad_mappings:
-    - rico:RecordSetType
-    - skos:Concept

schemas/20251121/linkml/modules/classes/AnnexCreationEvent.yaml

@@ -8,9 +8,9 @@ prefixes:
   prov: http://www.w3.org/ns/prov#
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_reason
+  - ../slots/has_or_had_reason
-- ../slots/temporal_extent
+  - ../slots/temporal_extent
 classes:
   AnnexCreationEvent:
     class_uri: prov:Activity

schemas/20251121/linkml/modules/classes/Annotation.yaml

@@ -8,20 +8,12 @@ prefixes:
   schema: http://schema.org/
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../classes/Agent
+  - ../slots/contains_or_contained
-- ../classes/AnnotationType
+  - ../slots/has_or_had_description
-- ../classes/Rationale
+  - ../slots/has_or_had_rationale
-- ../classes/Segment
+  - ../slots/has_or_had_type
-- ../slots/contains_or_contained
+  - ../slots/is_or_was_created_by
-- ../slots/has_or_had_description
-- ../slots/has_or_had_rationale
-- ../slots/has_or_had_type
-- ../slots/is_or_was_created_by
-- ./Agent
-- ./AnnotationType
-- ./Rationale
-- ./Segment
 classes:
   Annotation:
     class_uri: oa:Annotation

schemas/20251121/linkml/modules/classes/AnnotationMotivationType.yaml

@@ -16,17 +16,12 @@ prefixes:
   xsd: http://www.w3.org/2001/XMLSchema#
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../metadata
+  - ../metadata
-- ../slots/has_or_had_score
+  - ../slots/has_or_had_score
-- ../slots/motivation_type_description
+  - ../slots/motivation_type_description
-- ../slots/motivation_type_id
+  - ../slots/motivation_type_id
-- ../slots/motivation_type_name
+  - ../slots/motivation_type_name
-- ../slots/specificity_annotation
-- ./SpecificityAnnotation
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
 classes:
   AnnotationMotivationType:
     class_uri: oa:Motivation
@@ -46,7 +41,6 @@ classes:
     - motivation_type_id
     - motivation_type_name
     - motivation_type_description
-    - specificity_annotation
     - has_or_had_score
     slot_usage:
       motivation_type_id:

schemas/20251121/linkml/modules/classes/AnnotationMotivationTypes.yaml

@@ -13,20 +13,17 @@ prefixes:
   wcag: https://www.w3.org/WAI/WCAG21/
 default_prefix: hc
 imports:
-- linkml:types
+  - ./AnnotationMotivationType
-- ../metadata
+  - linkml:types
-- ../slots/has_or_had_score
+  - ../metadata
-- ../slots/motivation_type_name
+  - ../slots/has_or_had_score
-- ../slots/specificity_annotation
+  - ../slots/motivation_type_name
-- ./AnnotationMotivationType
-- ./SpecificityAnnotation
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
 classes:
   ClassifyingMotivation:
     is_a: AnnotationMotivationType
-    class_uri: oa:classifying
+    class_uri: hc:ClassifyingMotivation
+    exact_mappings:
+    - oa:classifying
     description: 'Motivation for categorizing or classifying content.
 
 
@@ -78,16 +75,14 @@ classes:
       - Iconographic classification (Iconclass)
 
       '
-    exact_mappings:
-    - oa:classifying
     close_mappings:
+    - oa:classifying
     - skos:Concept
     - crm:E17_Type_Assignment
     slot_usage:
       motivation_type_name:
         equals_string: classifying
     slots:
-    - specificity_annotation
     - has_or_had_score
     comments:
     - W3C Web Annotation standard motivation
@@ -100,7 +95,9 @@ classes:
     - skos:Concept
   DescribingMotivation:
     is_a: AnnotationMotivationType
-    class_uri: oa:describing
+    class_uri: hc:DescribingMotivation
+    exact_mappings:
+    - oa:describing
     description: 'Motivation for adding descriptive information to content.
 
 
@@ -152,16 +149,14 @@ classes:
       - Video/audio content summarization
 
       '
-    exact_mappings:
-    - oa:describing
     close_mappings:
+    - oa:describing
     - dcterms:description
     - crm:E62_String
     slot_usage:
       motivation_type_name:
         equals_string: describing
     slots:
-    - specificity_annotation
     - has_or_had_score
     comments:
     - W3C Web Annotation standard motivation
@@ -170,7 +165,9 @@ classes:
     - skos:Concept
   IdentifyingMotivation:
     is_a: AnnotationMotivationType
-    class_uri: oa:identifying
+    class_uri: hc:IdentifyingMotivation
+    exact_mappings:
+    - oa:identifying
     description: 'Motivation for identifying depicted entities.
 
 
@@ -222,16 +219,14 @@ classes:
       - Object-to-record linking (computer vision)
 
       '
-    exact_mappings:
-    - oa:identifying
     close_mappings:
+    - oa:identifying
     - crm:E15_Identifier_Assignment
     - schema:identifier
     slot_usage:
       motivation_type_name:
         equals_string: identifying
     slots:
-    - specificity_annotation
     - has_or_had_score
     comments:
     - W3C Web Annotation standard motivation
@@ -240,7 +235,9 @@ classes:
     - skos:Concept
   TaggingMotivation:
     is_a: AnnotationMotivationType
-    class_uri: oa:tagging
+    class_uri: hc:TaggingMotivation
+    exact_mappings:
+    - oa:tagging
     description: 'Motivation for adding tags or keywords.
 
 
@@ -292,16 +289,14 @@ classes:
       - Folksonomies alongside controlled vocabularies
 
       '
-    exact_mappings:
-    - oa:tagging
     close_mappings:
+    - oa:tagging
     - skos:Concept
     - schema:keywords
     slot_usage:
       motivation_type_name:
         equals_string: tagging
     slots:
-    - specificity_annotation
     - has_or_had_score
     comments:
     - W3C Web Annotation standard motivation
@@ -310,7 +305,9 @@ classes:
     - skos:Concept
   LinkingMotivation:
     is_a: AnnotationMotivationType
-    class_uri: oa:linking
+    class_uri: hc:LinkingMotivation
+    exact_mappings:
+    - oa:linking
     description: 'Motivation for linking to external resources.
 
 
@@ -362,9 +359,8 @@ classes:
       - Bibliographic references
 
       '
-    exact_mappings:
-    - oa:linking
     close_mappings:
+    - oa:linking
     - dcterms:relation
     - skos:related
     - schema:relatedLink
@@ -372,7 +368,6 @@ classes:
       motivation_type_name:
         equals_string: linking
     slots:
-    - specificity_annotation
     - has_or_had_score
     comments:
     - W3C Web Annotation standard motivation
@@ -381,7 +376,9 @@ classes:
     - skos:Concept
   CommentingMotivation:
     is_a: AnnotationMotivationType
-    class_uri: oa:commenting
+    class_uri: hc:CommentingMotivation
+    exact_mappings:
+    - oa:commenting
     description: 'Motivation for adding commentary.
 
 
@@ -431,16 +428,14 @@ classes:
       - Community engagement features
 
       '
-    exact_mappings:
-    - oa:commenting
     close_mappings:
+    - oa:commenting
     - schema:Comment
     - schema:UserComments
     slot_usage:
       motivation_type_name:
         equals_string: commenting
     slots:
-    - specificity_annotation
     - has_or_had_score
     comments:
     - W3C Web Annotation standard motivation
@@ -524,7 +519,6 @@ classes:
       motivation_type_name:
         equals_string: accessibility
     slots:
-    - specificity_annotation
     - has_or_had_score
     comments:
     - Heritage-specific extension beyond W3C standard
@@ -607,7 +601,6 @@ classes:
       motivation_type_name:
         equals_string: discovery
     slots:
-    - specificity_annotation
     - has_or_had_score
     comments:
     - Heritage-specific extension beyond W3C standard
@@ -692,7 +685,6 @@ classes:
       motivation_type_name:
         equals_string: preservation
     slots:
-    - specificity_annotation
     - has_or_had_score
     comments:
     - Heritage-specific extension beyond W3C standard
@@ -775,7 +767,6 @@ classes:
       motivation_type_name:
         equals_string: research
     slots:
-    - specificity_annotation
     - has_or_had_score
     comments:
     - Heritage-specific extension beyond W3C standard

schemas/20251121/linkml/modules/classes/AnnotationType.yaml

@@ -7,10 +7,10 @@ prefixes:
   skos: http://www.w3.org/2004/02/skos/core#
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_code
+  - ../slots/has_or_had_code
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
 classes:
   AnnotationType:
     class_uri: skos:Concept

schemas/20251121/linkml/modules/classes/AnnotationTypes.yaml

@@ -7,14 +7,14 @@ description: 'Concrete subclasses for AnnotationType taxonomy.
 
   '
 imports:
-- linkml:types
+  - ./AnnotationType
-- ./AnnotationType
+  - linkml:types
 prefixes:
   linkml: https://w3id.org/linkml/
   hc: https://nde.nl/ontology/hc/
 default_prefix: hc
 classes:
-  Comment:
+  CommentAnnotation:
     is_a: AnnotationType
     class_uri: hc:Comment
     description: A comment on a resource.
@@ -24,7 +24,7 @@ classes:
       custodian_types: '[''*'']'
     broad_mappings:
     - skos:Concept
-  Tag:
+  TagAnnotation:
     is_a: AnnotationType
     class_uri: hc:Tag
     description: A tag or keyword associated with a resource.

schemas/20251121/linkml/modules/classes/Any.yaml

@@ -5,7 +5,7 @@ prefixes:
   hc: https://nde.nl/ontology/hc/
   owl: http://www.w3.org/2002/07/owl#
 imports:
-- linkml:types
+  - linkml:types
 classes:
   Any:
     class_uri: owl:Thing

schemas/20251121/linkml/modules/classes/Appellation.yaml

@@ -12,18 +12,11 @@ prefixes:
   dcterms: http://purl.org/dc/terms/
   rdf: http://www.w3.org/1999/02/22-rdf-syntax-ns#
 imports:
-- linkml:types
+  - linkml:types
-- ../enums/AppellationTypeEnum
+  - ../enums/AppellationTypeEnum
-- ../metadata
+  - ../metadata
-- ../slots/has_or_had_score
+  - ../slots/has_or_had_score
-- ../slots/is_or_was_alternative_form_of
+  - ../slots/is_or_was_alternative_form_of
-- ../slots/specificity_annotation
-- ./CustodianName
-- ./Label
-- ./SpecificityAnnotation
-- ./TemplateSpecificityScore
-- ./TemplateSpecificityType
-- ./TemplateSpecificityTypes
 classes:
   CustodianAppellation:
     class_uri: crm:E41_Appellation
@@ -38,12 +31,12 @@ classes:
     - rdfs:label
     - dcterms:title
     slots:
-    - specificity_annotation
     - has_or_had_score
     - is_or_was_alternative_form_of
     slot_usage:
       is_or_was_alternative_form_of:
-        range: Label
+        range: uriorcurie
+        # range: Label
         inlined: true
         examples:
         - value: "Label:\n  label_value: \"Rijksmuseum\"\n  label_language: \"nl\"\n"

schemas/20251121/linkml/modules/classes/AppellationType.yaml

@@ -9,8 +9,8 @@ prefixes:
   rico: https://www.ica.org/standards/RiC/ontology#
   wd: http://www.wikidata.org/entity/
 imports:
-- linkml:types
+  - linkml:types
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
 classes:
   AppellationType:
     class_uri: skos:Concept

schemas/20251121/linkml/modules/classes/Applicant.yaml

@@ -10,12 +10,11 @@ prefixes:
 default_prefix: hc
 
 imports:
-- linkml:types
+  - linkml:types
-- ../metadata
+  - ../metadata
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_identifier
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
-- ../slots/has_or_had_type
+  - ../slots/has_or_had_type
-- ./ApplicantType
 classes:
   Applicant:
     class_uri: schema:Person

schemas/20251121/linkml/modules/classes/ApplicantRequirement.yaml

@@ -14,13 +14,11 @@ prefixes:
   xsd: http://www.w3.org/2001/XMLSchema#
 default_prefix: hc
 imports:
-- linkml:types
+  - linkml:types
-- ../metadata
+  - ../metadata
-- ../slots/can_or_could_be_fulfilled_by
+  - ../slots/can_or_could_be_fulfilled_by
-- ../slots/has_or_had_description
+  - ../slots/has_or_had_description
-- ../slots/imposes_or_imposed
+  - ../slots/imposes_or_imposed
-- ./Applicant
-- ./GeographicExtent
 classes:
   ApplicantRequirement:
     class_uri: schema:Requirement

schemas/20251121/linkml/modules/classes/ApplicantType.yaml

@@ -10,10 +10,10 @@ prefixes:
 default_prefix: hc
 
 imports:
-- linkml:types
+  - linkml:types
-- ../metadata
+  - ../metadata
-- ../slots/has_or_had_identifier
+  - ../slots/has_or_had_identifier
-- ../slots/has_or_had_label
+  - ../slots/has_or_had_label
 classes:
   ApplicantType:
     class_uri: skos:Concept