Commit graph

47 commits

Author SHA1 Message Date
kempersc
66adec257e Add scripts for normalizing LinkML schemas and validating schema integrity
- Implement `normalize_linkml_alt_descriptions.py` to convert structured alt_descriptions to the expected scalar form.
- Implement `normalize_linkml_structured_aliases.py` to flatten language-keyed structured_aliases into a standard list-of-objects format.
- Implement `validate_linkml_schema_integrity.py` to validate the integrity of LinkML schema bundles, checking for import resolution, YAML parsing, and reference existence.
2026-02-16 10:16:51 +01:00
kempersc
37852a46b0 Refactor significance and social media classes for improved clarity and multilingual support
- Updated SignificanceType.yaml to enhance descriptions, add alternative language descriptions, and clarify comments.
- Refined CommunitySignificance, EconomicSignificance, HistoricalSignificance, ScientificSignificance, AestheticSignificance, TerroirSignificance, and DiplomaticSignificance classes with structured aliases and comments.
- Enhanced SilenceSegment.yaml with multilingual descriptions and structured aliases.
- Improved Size.yaml with clearer descriptions and added multilingual support.
- Updated SocialMediaPlatformType.yaml and SocialMediaProfile.yaml to include alternative descriptions in multiple languages and refined modeling notes.
- Added has_url slot to SocialMediaProfile for better URL management.
- Enhanced Warehouse and WarehouseType classes with preserved modeling notes for clarity on definitions and distinctions.
- Updated WebClaim and WebPortalType classes with preserved descriptions for better understanding of their roles and structures.
2026-02-15 23:26:52 +01:00
kempersc
2c9d3598dc Refactor Wikidata schema classes for improved clarity and multilingual support
- Updated titles for clarity in WikidataClassification, WikidataCollectionInfo, WikidataContact, WikidataCoordinates, WikidataEnrichment, WikidataEntity, WikidataIdentifiers, WikidataLocation, WikidataMedia, and WikidataOrganization classes.
- Enhanced descriptions with multilingual support, providing translations in Dutch, German, French, Spanish, Arabic, Indonesian, and Chinese.
- Added structured aliases for better synonym mapping in multiple languages.
- Improved comments and keywords for better understanding and searchability.
- Ensured consistent use of slots and mappings across classes to align with ontology standards.
2026-02-15 14:08:11 +01:00
kempersc
fcd1c21c63 Add aliases and enhance slot definitions across various modules
- Added new aliases for existing slots to improve clarity and usability, including:
  - has_deadline: has_embargo_end_date
  - has_extent: has_extent_text
  - has_fonds: has_fond
  - has_laboratory: conservation_lab
  - has_language: has_iso_code639_1, has_iso_code639_3
  - has_legal_basis: legal_basis
  - has_light_exposure: max_light_lux
  - has_measurement_unit: has_unit
  - has_note: has_custodian_observation
  - has_occupation: occupation
  - has_operating_hours: has_operating_hours
  - has_position: position
  - has_quantity: has_artwork_count, link_count
  - has_roadmap: review_date
  - has_skill: skill
  - has_speaker: speaker_label
  - has_specification: specification_url
  - has_statement: rights_statement_url, rights_statement
  - has_type: custodian_only
  - has_user_category: serves_visitors_only
  - hold_record_set: record_count
  - identified_by: has_index_number
  - in_period: has_period
  - in_place: has_place
  - in_series: has_series
  - measure: has_measurement
  - measured_on: measurement_date
  - organized_by: has_organizer
  - originate_from: has_origin
  - part_of: suborganization_of
  - published_on: has_publication_date
  - receive_investment: has_investment
  - related_to: connection_heritage_type
  - require: preservation_requirement
  - safeguarded_by: current_keeper, record_holder_note
  - state: states_or_stated
  - take_comission: takes_or_took_comission
  - take_place_at: takes_or_took_place_at
  - transmit_through: transmits_or_transmitted_through
  - warrant: warrants_or_warranted

- Introduced a new slot definition for evaluated_through to capture evaluation methodologies and review statuses.
2026-02-14 14:41:49 +01:00
kempersc
820d3969bb Refactor code structure for improved readability and maintainability 2026-02-11 12:11:59 +01:00
kempersc
d3a65a496c Refactor slot names and descriptions across multiple YAML files for consistency and clarity
- Updated slot names to improve semantic clarity:
  - `has_type` changed to `categorized_as`
  - `has_location` changed to `located_at`
  - `coordinates` changed to `has_coordinates`
  - `country` changed to `in_country`
  - `like_count` changed to `has_quantity`

- Adjusted descriptions and annotations for slots to enhance understanding and alignment with ontology standards.

- Modified imports in `WomensArchives.yaml` and `WomensArchivesRecordSetTypes.yaml` to reflect new slot names.

- Enhanced multilingual support in `has_record_set` slot definition with additional translations and structured aliases.

- General cleanup and standardization of slot definitions across various classes including `Wikidata`, `Youtube`, and `WorkExperience`.
2026-02-11 11:54:34 +01:00
kempersc
69a22e2b5a Refactor and expand LinkML slot definitions
- Deleted the `rights_statement_url` slot definition as it is no longer needed.
- Added multiple new slots including `has_legal_basis`, `has_statement`, `impose`, `pose_condition`, and `reviewed_through` with detailed descriptions and ontology alignments.
- Updated existing slots to improve clarity and consistency, including renaming `close_mappings` to `related_mappings` in several definitions.
- Enhanced the `require` slot with additional aliases for better usability.
- Improved documentation and comments across all slot definitions to clarify their purpose and usage.
2026-02-08 23:37:44 +01:00
kempersc
8f77f62585 update slot imports in classes 2026-02-08 19:22:13 +01:00
kempersc
90842851c2 Add slot definitions for 'updated_at' and 'written_in' with multilingual support and ontology alignment
- Created 'updated_at.yaml' to record the last modified date and time of entities, including multilingual descriptions and structured aliases.
- Created 'written_in.yaml' to specify the language in which content is composed, covering both natural and programming languages, with detailed comments and close ontology mappings.
2026-02-07 11:22:05 +01:00
kempersc
6435786556 edit slots 2026-02-04 00:24:46 +01:00
kempersc
a83f04d9c4 Refactor code structure for improved readability and maintainability 2026-02-02 15:57:17 +01:00
kempersc
fc405445c6 Refactor and update schema definitions
- Removed obsolete slots: `has_or_had_custodian_observation`, `provider`, and `specificity_annotation`.
- Updated `has_or_had_score` slot to use `SpecificityScore` class and modified its description and examples.
- Added new slots: `end_seconds`, `end_time`, `has_archive_path`, `has_or_had_custodian_name`, `protocol_name`, and `protocol_version`.
- Introduced a script `check_annotation_types.py` to validate the presence and structure of `custodian_types` in YAML files.
- Added a script `update_specificity.py` to automate updates related to `SpecificityAnnotation` to `SpecificityScore`.
2026-02-01 19:55:38 +01:00
kempersc
7e0622c755 chore: clean up code structure and remove redundant changes 2026-01-31 21:24:53 +01:00
kempersc
ca4a54181e Refactor schema files to improve clarity and maintainability
- Updated WorldCatIdentifier.yaml to remove unnecessary description and ensure consistent formatting.
- Enhanced WorldHeritageSite.yaml by breaking long description into multiple lines for better readability and removed unused attributes.
- Simplified WritingSystem.yaml by removing redundant attributes and ensuring consistent formatting.
- Cleaned up XPathScore.yaml by removing unnecessary attributes and ensuring consistent formatting.
- Improved YoutubeChannel.yaml by breaking long description into multiple lines for better readability.
- Enhanced YoutubeEnrichment.yaml by breaking long description into multiple lines for better readability.
- Updated YoutubeVideo.yaml to break long description into multiple lines and removed legacy field name.
- Refined has_or_had_affiliation.yaml by removing unnecessary comments and ensuring clarity.
- Cleaned up is_or_was_retrieved_at.yaml by removing unnecessary comments and ensuring clarity.
- Added rules for generic slots and avoiding rough edits in schema files to maintain structural integrity.
- Introduced changes_or_changed_through.yaml to define a new slot for linking entities to change events.
2026-01-31 00:46:23 +01:00
kempersc
4034c2a00a Refactor schema slots across multiple classes to improve consistency and clarity
- Removed unused slots from TaxonomicAuthority, TechnicalFeature, TelevisionArchive, TentativeWorldHeritageSite, Threat, TimeSpan, Title, TradeRegister, TradeUnionArchive, TradeUnionArchiveRecordSetType, TransferEvent, UNESCODomain, UnitIdentifier, UniversityArchive, UnspecifiedType, UserCommunity, Venue, Vereinsarchiv, Verlagsarchiv, VerlagsarchivRecordSetType, Version, Verwaltungsarchiv, VideoAnnotationTypes, VideoAudioAnnotation, VideoFrame, VideoPost, VideoSubtitle, VideoTextContent, Warehouse, WebArchive, WebClaim, WebClaimsBlock, WebLink, WebPortal, WebPortalTypes, WomensArchives, WordCount, WorldHeritageSite, WritingSystem, and XPathScore.
- Introduced new slot is_or_was_retrieved_at for tracking data retrieval timestamps.
2026-01-31 00:28:09 +01:00
kempersc
6203d19875 Refactor YAML schemas for clarity and consistency
- Removed unnecessary line breaks and whitespace in descriptions across multiple classes including Taxon, TaxonomicAuthority, TechnicalFeature, TradeRegister, TransferEvent, UNESCODomain, UnspecifiedType, UserCommunity, Version, VideoAnnotationTypes, VideoFrame, VideoTextContent, WebArchive, WebClaimsBlock, WebLink, WebPortal, and WordCount.
- Updated descriptions to enhance readability and maintain a uniform style.
- Migrated attributes and slots as per the latest schema rules, ensuring alignment with the defined standards.
- Improved documentation for better understanding of class purposes and usage scenarios.
2026-01-31 00:21:50 +01:00
kempersc
0c5211e40a removed convenience slots 2026-01-31 00:15:53 +01:00
kempersc
14375c583e added hidden slots 2026-01-30 23:56:19 +01:00
kempersc
f7bf1cc5ae Refactor schema slots and classes
- Deleted obsolete slot definitions: statement_summary, statement_text, statement_type, status_name, supersede_articles, supersede_condition, supersede_name, temporal_dynamics, total_amount, typical_contents, use_cases, was_acquired_through, was_fetched_at, was_retrieved_at.
- Updated existing slot definitions for states_or_stated to enhance clarity and structure.
- Introduced new classes: Article, ConditionofAccess, FinancialStatementType, MaximumQuantity, Series, Summary, Type, and their respective slots to improve schema organization and usability.
- Added new slots: changes_or_changed_through, has_or_had_condition_of_access, has_or_had_heritage_type, is_or_was_part_of_series, is_or_was_retrieved_at, maximum_of_maximum to capture additional metadata and relationships.
2026-01-30 00:29:31 +01:00
kempersc
1f8776bef4 Update schemas and slots with new mappings and descriptions
- Updated manifest.json with new generated timestamp.
- Added close mappings to APIRequest and Administration classes.
- Renamed slots in AccessPolicy to has_or_had_embargo_end_date and has_or_had_embargo_reason.
- Changed class_uri for Accumulation to rico:AccumulationRelation and updated description.
- Added exact mappings to Altitude, AppellationType, and ArchitecturalStyle classes.
- Removed deprecated slots from CollectionManagementSystem and updated has_or_had_type.
- Added new slots for has_or_had_embargo_end_date and has_or_had_embargo_reason.
- Updated slot definitions for has_or_had_assessment, has_or_had_sequence_index, and others with new URIs and mappings.
- Removed unused slots end_seconds and end_time.
- Added new slot definitions for has_or_had_exhibition_type, has_or_had_extent_text, and is_or_was_documented_by.
2026-01-29 13:33:23 +01:00
kempersc
c60b523f29 Implement feature X to enhance user experience and fix bug Y in module Z 2026-01-29 00:12:27 +01:00
kempersc
68c2274e5f Refactor IdentificationEvent and StorageConditionPolicy schemas; remove attributes from IdentificationEvent and update humidity settings in StorageConditionPolicy. Add comprehensive ghost slots list. 2026-01-28 15:58:44 +01:00
kempersc
f800e198ff Refactor code structure for improved readability and maintainability 2026-01-28 01:11:55 +01:00
kempersc
776462de90 Migrate multiple slots to enhance semantic clarity and align with best practices
- Migrated catering_type to CateringType with subclasses for better classification.
- Updated certainty_level to has_or_had_level for improved metadata consistency.
- Addressed cessation_observed_in by confirming existing temporal data structure.
- Created NetAsset class and updated financial statements for richer financial modeling.
- Completed migrations for default_access_policy, default_audio_language, and default_language to structured classes.
- Migrated default_position to structured Alignment class for better representation.
- Updated defined_by_standard to broaden range for identifier standards.
- Migrated definition to structured Resolution class for video resolution modeling.
- Completed migrations for degree_name, deliverable, and departement_code to structured classes.
- Migrated deployment_date to structured DeploymentEvent with temporal extent.
- Migrated derived_from_entity and derived_from_observation to new reference structures.
- Completed description and description_text migrations to enhance content modeling.
- Migrated detection_count, detection_level, and detection_threshold to structured slots with classes.
- Migrated device-related slots to structured classes for better identification and classification.
- Added new slots and classes for historic building and web address modeling.
2026-01-25 12:47:38 +01:00
kempersc
f622450304 Add new slots and update existing ones for heritage ontology
- Introduced new slots for administrative context, CMS categories, detected CMS, product version, co-funding requirements, co-organizers, collection access, collection dates, characteristics, class definitions, Dutch context, example locations, names, notes, and Wikidata IDs.
- Enhanced existing slots such as has_or_had_organizer and offers_or_offered_access to align with RiC-O naming conventions and improve temporal semantics.
- Migrated and restructured descriptions for clarity and consistency across various slots, ensuring alignment with Schema.org and other ontological standards.
- Implemented multivalued and inlined options for several slots to accommodate complex data structures.
- Updated annotations and examples to reflect the latest usage scenarios and best practices in the heritage sector.
2026-01-19 16:05:32 +01:00
kempersc
3da90b940e feat(schema): complete multiple slot_fixes.yaml migrations
All checks were successful
Deploy Frontend / build-and-deploy (push) Successful in 2m4s
Session 2026-01-19: Completed remaining migrations per Rules 53/56/60.

Major migrations:
1. claim_type → has_or_had_type + ClaimType/ClaimTypes (60+ concrete types in 11 categories)
2. circumstances_of_death → is_deceased + DeceasedStatus + CauseOfDeath
3. claims_count → has_or_had_quantity + Quantity (with based_on_claim for provenance)
4. classification_status → has_or_had_type + ClassificationStatusType

Created files:
- ClaimType.yaml, ClaimTypes.yaml (abstract base + 60+ concrete subclasses)
- DeceasedStatus.yaml, CauseOfDeath.yaml, CauseOfDeathTypeEnum.yaml
- ClassificationStatus.yaml, ClassificationStatusType.yaml, ClassificationStatusTypes.yaml
- CITESAppendix.yaml, City.yaml, CertaintyLevel.yaml
- is_deceased.yaml, is_or_was_caused_by.yaml, based_on_claim.yaml

Archived slots:
- claim_type, circumstances_of_death, claims_count, classification_status

Added Rule 60 to AGENTS.md: No Migration Deferral - agents MUST execute all migrations.

All 527 slot_fixes.yaml entries now complete (100%).
2026-01-19 13:05:53 +01:00
kempersc
4a277d7d42 standardise slots 2026-01-19 00:09:28 +01:00
kempersc
4319f38c05 Add archived slots for audience size, audience type, and capacity metrics
- Created new YAML files for audience size and audience type slots, defining their properties and annotations.
- Added archived capacity slots including cubic meters, linear meters, item count, and descriptions, with appropriate URIs and ranges.
- Introduced a template specificity slot for context-aware RAG filtering.
- Consolidated capacity-related slots into a unified structure, including has_or_had_capacity, capacity_type, and capacity_value, with detailed descriptions and examples.
2026-01-17 18:53:23 +01:00
kempersc
54b26343c9 Add initial version of QUDT ontology file 2026-01-17 00:08:39 +01:00
kempersc
f9f3cc8e74 fix: resolve YAML import indentation and add missing slot descriptions
Schema Improvements:
- Fix YAML import indentation across 800+ class files (sed: '^- ../' → '  - ../')
- Add descriptions to 26 inline slots missing them (lint warnings)
- Fix malformed imports in BirthPlace.yaml and CustodianObservation.yaml

Validation Results:
- linkml-lint: 4 warnings (intentional SCREAMING_CASE tier names)
- gen-owl: SUCCESS (164,069 lines generated)
- gen-json-schema: SUCCESS (9.4MB generated)

Files affected: 1,034 files, +23,908 -15,200 lines
2026-01-16 00:09:28 +01:00
kempersc
37d923cae1 Refactor slot names and update imports for consistency
- Migrated `was_generated_by` to `is_or_was_generated_by` and `was_derived_from` to `is_or_was_derived_from` across multiple YAML schema files as per Rule 53.
- Updated relevant imports, slot lists, and slot usage keys to reflect the new naming conventions.
- Added migration comments for clarity and tracking.
- Introduced a migration script to automate the changes across all affected files.
2026-01-15 15:07:53 +01:00
kempersc
6c3fa6b5a3 Remove deprecated slots and add new slot definitions for enhanced data modeling
- Deleted obsolete slot definitions for work_location and workshop_space.
- Introduced new TaxonName class to represent scientific taxonomic names with detailed attributes.
- Archived existing slots related to surname_prefix, target_name, taxon_name, terminal_count, text_region_count, title, title_proper, total_chapter, total_characters_extracted, total_connections_extracted, track_name, transcript_format, traveling_venue, type_label, type_status, typical_responsibility, unesco_domain, unesco_inscription_year, unesco_list_status, uniform_title, unit_name, used_by_custodian, uv_filtered_required, valid_from_geo, valid_to_geo, validation_status, variant_of_name, verification_date, viability_status, within_auxiliary_place, and within_place.
- Updated slot descriptions and structures to improve clarity and compliance with standards.
2026-01-15 11:42:35 +01:00
kempersc
58940582c3 Refactor warehouse and video slots: Migrate and archive multiple slots including warehouse_security_level, warehouse_name, and video_id. Introduce UnitIdentifier class to replace unit_id and unit_identifier slots. Update consuming classes and document migration details. Archive obsolete slot definitions for track_id, tracking_ids_assigned, vendor_name, and others. Ensure compliance with migration rules and maintain historical records in the archive. 2026-01-14 22:20:44 +01:00
kempersc
60e66d60f9 Add new slots and classes for enhanced documentation and availability tracking
- Introduced `is_or_was_created_through` slot to indicate content creation methods, replacing previous boolean flags.
- Added `is_or_was_required` slot for generic temporal boolean requirements, aligning with Schema.org.
- Created `AutoGeneration` class to represent automatic content generation, capturing methods and provenance.
- Established `AvailabilityStatus` class to model resource availability with temporal validity.
- Developed `Documentation` class for structured documentation resources, replacing domain-specific slots.
- Implemented `Taxon` class for biological classification in natural history collections.
- Archived previous slots related to API availability and documentation, ensuring a clean schema.
- Enhanced existing slots with detailed descriptions and examples for clarity and usability.
2026-01-14 13:09:31 +01:00
kempersc
355d8be51d centralise slots 2026-01-12 14:33:56 +01:00
kempersc
0d5d48568d refactor(schema): centralize slot definitions per Rule 38
- Remove slot_uri, description, mappings from slot_usage sections
- Move these properties to centralized slot files in modules/slots/
- Keep only class-specific overrides in slot_usage (required, inlined, examples)
- Update 1,499 centralized slot files with enriched definitions
- Clean 188 class files

Violations fixed:
- slot_uri in slot_usage: 1,676 → 0
- description in slot_usage: 2,287 → 0 (moved to centralized)

Schema still validates: 816 classes, 2028 slots, 127 enums
2026-01-11 23:27:17 +01:00
kempersc
174a420c08 refactor(schema): centralize 1515 inline slot definitions per Rule 48
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Deploy Frontend / build-and-deploy (push) Successful in 3m57s
- Remove inline slot definitions from 144 class files
- Create 7 new centralized slot files in modules/slots/:
  - custodian_type_broader.yaml
  - custodian_type_narrower.yaml
  - custodian_type_related.yaml
  - definition.yaml
  - finding_aid_access_restriction.yaml
  - finding_aid_description.yaml
  - finding_aid_temporal_coverage.yaml
- Add centralize_inline_slots.py automation script
- Update manifest with new timestamp

Rule 48: Class files must NOT define inline slots - all slots
must be imported from modules/slots/ directory.

Note: Pre-existing IdentifierFormat duplicate class definition
(in Standard.yaml and IdentifierFormat.yaml) not addressed in
this commit - requires separate schema refactor.
2026-01-11 22:02:14 +01:00
kempersc
626bd3a095 refactor(schemas): apply naming conventions to 261 class files
- Apply Rule 39: RiC-O style hasOrHad*/isOrWas* for temporal slots
- Apply Rule 43: Singular noun convention (keywords → keyword)
- Update slot references to match renamed slot files
- Maintain schema integrity across all class definitions
2026-01-10 15:36:33 +01:00
kempersc
095a3f949c refactor(linkml): apply RiC-O slot naming conventions to /schemas/ (Rule 39)
Apply same RiC-O-style slot naming refactor to /schemas/20251121/linkml/
that was previously applied to frontend/public/schemas/:

- Add 'has_' prefix for possession predicates
- Add 'is_or_was_' prefix for temporal inverse relationships
- Add 'has_or_had_' for bidirectional temporal relations
- Add new slots: is_or_was_aggregated_by, is_or_was_allocated_by, etc.
- Update count slots with proper descriptions

This ensures consistency between the source schema directory and the
frontend-served schemas.

514 files changed, +6,325 insertions, -4,255 deletions
2026-01-10 12:55:45 +01:00
kempersc
0393b321c9 refactor(schema): unify custodian_type slots into has_or_had_custodian_type (Rule 39, 43)
- Migrate 236+ class files from custodian_types to has_or_had_custodian_type
- Archive deprecated slots: custodian_type, custodian_types, custodian_type_broader/narrower/related
- Update main schema and manifest imports
- Fix Custodian.yaml class to use new slot
- Fix annotation format (list→scalar) in has_or_had_custodian_type.yaml

Rules applied:
- Rule 39: RiC-O naming convention (hasOrHad pattern)
- Rule 43: Slot nouns must be singular (multivalued:true for cardinality)
- Rule 38: Slot centralization with semantic URI
2026-01-09 10:55:21 +01:00
kempersc
b34992b1d3 Migrate all 293 class files to ontology-aligned slots
Extends migration to all class types (museums, libraries, galleries, etc.)

New slots added to class_metadata_slots.yaml:
- RiC-O: rico_record_set_type, rico_organizational_principle,
  rico_has_or_had_holder, rico_note
- Multilingual: label_de, label_es, label_fr, label_nl, label_it, label_pt
- Scope: scope_includes, scope_excludes, custodian_only,
  organizational_level, geographic_restriction
- Notes: privacy_note, preservation_note, legal_note

Migration script now handles 30+ annotation types.
All migrated schemas pass linkml-validate.

Total: 387 class files now use proper slots instead of annotations.
2026-01-06 12:24:54 +01:00
kempersc
11983014bb Enhance specificity scoring system integration with existing infrastructure
- Updated documentation to clarify integration points with existing components in the RAG pipeline and DSPy framework.
- Added detailed mapping of SPARQL templates to context templates for improved specificity filtering.
- Implemented wrapper patterns around existing classifiers to extend functionality without duplication.
- Introduced new tests for the SpecificityAwareClassifier and SPARQLToContextMapper to ensure proper integration and functionality.
- Enhanced the CustodianRDFConverter to include ISO country and subregion codes from GHCID for better geospatial data handling.
2026-01-05 17:37:49 +01:00
kempersc
41959f0766 correct HCID! 2025-12-10 13:01:13 +01:00
kempersc
d661947830 update enriched entries 2025-12-03 17:38:46 +01:00
kempersc
097d116b72 enrich entries 2025-12-01 16:06:34 +01:00
kempersc
2497e5913f enrich entries 2025-12-01 00:37:24 +01:00
kempersc
cd0ff5b9c7 wrap up voorbeeld lijst 2025-11-27 10:58:53 +01:00